Comparison of different advanced oxidation processes for the degradation of ionic liquids
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泥鳅不同脱腥方法比较及腥味物质分析王晓君1,王振华1,王亚娜1,尚永彪1,2,3,*(1.西南大学食品科学学院,重庆 400715;2.农业部农产品贮藏保鲜质量安全评估实验室(重庆),重庆 400715;3.重庆市特色食品工程技术研究中心,重庆 400715)摘 要:以泥鳅为原料,分别采用乌龙茶、面包酵母发酵和酵母细胞液对其进行脱腥处理,以硫代巴比妥酸(thiobarbituric acid,TBA)值、三甲胺(trimethylamine,TMA)值和感官评价值为评价指标,判断其脱腥效果,筛选出较好的脱腥方法及条件,最后通过气相色谱-质谱联用仪(gas chromatography-mass spectrometry,GC-MS)进行验证并判定泥鳅特殊腥味物质。
结果表明:脱腥效果从高到低依次为酵母细胞液法、乌龙茶法、面包酵母发酵法。
酵母细胞液法脱腥的适宜条件为25 ℃、1.5 h、pH 6.5;乌龙茶法脱腥的适宜条件为:乌龙茶茶叶质量分数3%、25 ℃、3 h;面包酵母法脱腥适宜条件为35 ℃、0.5 h、pH 6.5。
由GC-MS分析结果可知,泥鳅原样及乌龙茶法、酵母法、酵母细胞液法脱腥处理后泥鳅挥发性风味物质分别检测出68、55、55、51 种,醛类物质相对含量分别为73.71%、40.17%、42.66%、39.76%,验证结果与TBA值、TMA值和腥味值的评价结果相一致。
泥鳅腥味物质可能是己醛、壬醛、辛醛、E-2-辛烯醛、E-2-壬烯醛、E-2,4-癸二烯醛、庚醛、2,3-辛二酮等。
关键词:泥鳅;脱腥;酵母细胞液;乌龙茶;气相色谱-质谱联用Comparison of Different Deodorization Methods for Loach and Analysis of Odor SubstancesWANG Xiaojun1, WANG Zhenhua1, WANG Yana1, SHANG Yongbiao1,2,3,*(1. College of Food Science, Southwest University, Chongqing 400715, China; 2. Quality and Safety Risk Assessment Laboratory ofProducts Preservation (Chongqing), Ministry of Agriculture, Chongqing 400715, China; 3. Chongqing Engineering Research Center ofRegional Food, Chongqing 400715, China)Abstract: This study was done to establish a more efficient method and appropriate conditions for deodorizing loach. For this purpose, three deodrization methods, namely, olong tea infusion, bakery yeast and yeast extract, were compared with respect to thiobarbituric acid (TBA) value, trimethylamine (TMA) value and sensory evaluation score. Besides, the odor compounds of loach were identified and confirmed by gas chromatography-mass spectrometry detector (GC-MS). The results showed that the efficiency of three deodorization methods was in the decreasing order of yeast extract, oolong tea and bakery yeast. The suitable treatment conditions with yeast extract, olong tea infusion and bakery yeast were determined as25 ℃, 1.5 h and pH 6.5; 3% (tea concentration), 25 ℃ and 3 h; and 35 ℃, 0.5 h and pH 6.5, respectively. GC-MS analysisrevealed that a total of 68, 55, 55 and 51 volatile flavor substances were detected in loaches before and after deodorization with oolong tea, bakery yeast and yeast extract, respectively, with relative contents of aldehydes of 73.71%, 40.17%,42.66% and 39.76%, respectively, which supported the results of TBA value, TMA value and odor analysis. The off-flavorsubstances of loach may include hexanal, heptyl, octyl aldehyde, E-2-octene aldehyde, E-2-nonenal, E-2,4-decadiene, heptaldehyde, and 2,3-butanedione.Key words: loach; deodorization; yeast extract; oolong tea; gas chromatography-mass spectrometry (GC-MS)DOI:10.7506/spkx1002-6630-201615021中图分类号:TS251 文献标志码:A 文章编号:1002-6630(2016)15-0124-06引文格式:王晓君, 王振华, 王亚娜, 等. 泥鳅不同脱腥方法比较及腥味物质分析[J]. 食品科学, 2016, 37(15): 124-129.DOI:10.7506/spkx1002-6630-201615021. WANG Xiaojun, WANG Zhenhua, WANG Yana, et al. Comparison of different deodorization methods for loach and analysis of odor substances[J]. Food Science, 2016, 37(15): 124-129. (in Chinese with English abstract) DOI:10.7506/ spkx1002-6630-201615021. 收稿日期:2016-03-12基金项目:重庆市特色食品工程技术研究中心能力提升项目(cstc2014pt-gc8001)作者简介:王晓君(1991—),女,硕士研究生,研究方向为食品安全与质量控制。
ISSN 0973-2063 (online) 0973-8894 (print) 234Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical InformaticsProtein sequence redundancy reduction: comparison of various methodsKresimir Sikic 1, 2,*, Oliviero Carugo 1, 31Department of Structural and Computational Biology, Max F. Perutz Laboratories, Vienna University, 1030 Vienna, Austria; 2Department of Electronic Systems and Information Processing, Faculty of Electrical Engineering and Computing, University of Zagreb, 10000 Zagreb, Croatia; 3Departement of General Chemistry, University of Pavia, I-27100 Pavia, Italy; Kresimir Sikic- Email: kresimir.sikic@univie.ac.at, Phone: +431427752208, *Corresponding author.Received October 20, 2010; Accepted November 11, 2010; Published November 27, 2010Abstract:Non-redundant protein datasets are of utmost importance in bioinformatics. Constructing such datasets means removing protein sequences that overreach certain similarity thresholds. Several programs such as ‘Decrease redundancy’, ‘cd-hit’, ‘Pisces’, ‘BlastClust’ and ‘SkipRedundant’ are available. The issue that we focus on here is to what extent the non-redundant datasets produced by different programs are similar to each other. A systematic comparison of the features and of the outputs of these programs, by using subsets of the UniProt database, was performed and is described here. The results show high level of overlap between non-redundant datasets obtained with the same program fed with the same initial dataset but different percentage of identity threshold, and moderate levels of similarity between results obtained with different programs fed with the same initial dataset and the same percentage of identity threshold. We must be aware that some differences may arise and the use of more than one computer application is advisable.Keywords: protein sequence, removing redundancy, sequence alignment.Background:Protein sequence databases are extremely redundant and their redundancy must be removed in many different studies. Redundancy in a dataset occurs when several similar data are present at the same time [1]. In bioinformatics, redundancy in a collection of sequences occurs when one or more similar/homologous sequences are present in the same set of data. The inclusion of similar sequences in certain analyses will introduce undesirable biases. This occurs in particular when average values or trends have to be extracted from the data, like for example the average amino acid composition [2, 3]. Another important issue is that the biological databases, such as UniProt [4], are growing at an astronomical rate, together with the redundancy of their entries. As a consequence, hardware requirements (CPU and memory) become increasingly expensive and redundancy reduction results also in lower computational costs.Different computer programs for removing redundancy are available. They utilize different alignment methods (global or local alignment) and clustering algorithms. In the present work, several computer programs are compared systematically. Beside a general evaluation of their results, the main concern is to what extent the results of different methods are similar or different. Certain differences have been observed when using programs that utilize different methodologies. This indicates that any research that requires non-redundant sequence datasets should be taken with consciousness. If possible, it would be preferable that the research should be conducted using several non-redundant datasets obtained by using different programs.Software:Five different computer programs were used: Decrease Redundancy [5], cd-hit [6], Pisces [7, 8], BlastClust [9, 10] and SkipRedundant [11]. Some of them, like cd-hit and Pisces, are standalone applications, others are part of standalone packages such as BLAST (BlastClust) and EMBOSS (SkipRedundant), while one is available as a web based server (Decrease Redundancy). The computer programs used in this study along with version number (where known) and URL are listed in Table 1. Four different percentages of identity (PID) thresholds were used: 40%, 50%, 75% and 90%. Smaller and more stringent values were not used, since they cannot be used by all the computer programs.Test environment:All standalone applications including those that are part of standalone program packages were tested on the same test platform: Intel Xenon 3.4GHz (4 CPU) with 2GB RAM, running Red Hat 4.1.2-13 (Linux version 2.6.22.2-42.fc6). All the tested standalone applications don’t impose any CPU or memory requirements on the computer. However, as the applications utilize Needleman-Wunsch or Smith-Waterman sequence alignment algorithms, which both have time and space complexity O(MxN) (M is number of sequences and N is length of sequences), the computational requirements depend on the number and size of the sequences and not as much of the program itself. The program Decrease redundancy was tested using its web server, since the standalone software is not distributed.Datasets:The sets of protein sequences, necessary for testing the various computer programs, were extracted from the UniProt database using a random number generator. Extracted sequences were used to build random sets of 100, 1,000, and 10,000 protein sequences. This procedure was repeated inISSN 0973-2063 (online) 0973-8894 (print) 235Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical Informaticsorder to build datasets containing only small proteins with less than 100 residues, datasets with larger proteins (100-200 residues, 200-300 residues and so on), and datasets containing only large proteins with more than 1,000 residues. In such way 33 datasets, summarized in Table 2 (see supplementary material), were constructed. All of them were used as inputs for the computer programs of Table 1 (see supplementary material), with the exception of Decrease Redundancy that, due to the web server CPU limitations, could process only datasets with 100 sequences or less.Definition of percentage of sequence identity (PID):The percentage of sequence identity (PID) for two aligned protein sequences is defined as number of aligned positions where the matching characters (amino acids) are identical divided by the number of aligned positions (including gaps, if any). This definition is not superfluous, since there is often some uncertainty about the operational definition of sequence identity [12].Overview of different methods:The principal characteristics of the computer programs used in the present work are summarized in Table 3 (see supplementary material). Most of the programs allow choosing PID threshold in range from 0 to 100 percent, but some of them, like Pisces and cd-hit, have to some extent limited ranges. The maximum accepted length of the protein is not declared in most cases with an exception of cd-hit where the maximum length is limited by the maximum integer size. The maximum number of sequences that the programs are capable of processing is also not declared by any of these programs.All the programs accept input files in FASTA format, but only Decrease Redundancy, cd-hit and SkipRedundant provide results in the same format. Others like Pisces and BlastClust provide only a list of protein identification codes in the output file. We also verified whether the output is dependent on the input order, meaning whether the non-redundant output dataset is always the same independently of the permutations of the sequences in the input dataset. In the case of Pisces and BlastClust the output is not dependent on the order of the input. However, this is not the case with the other programs where the output is dependent on the order of the input sequences. Also, the number of non-redundant sequences outputted by all the computer programs is independent of the permutations of the input dataset.Decrease Redundancy:The algorithm used in this program was developed by Cédric Notredame and is to date unpublished. Therefore any description of this algorithm is currently not available. Cd-hit:Cd-hit uses the greedy incremental algorithm to cluster sequences and remove redundancy. Sequences are first sorted in a descending manner according to their length. The longest sequence is taken as the representative member of the first cluster. Then each remaining sequence is compared to the representatives of the existing clusters and if it is sufficiently similar to one of them, it is inserted into the cluster. Otherwise, a new cluster is formed with that sequence as a representative. In this way, all clusters are assembled.Due to the large number of pairwise alignments, empirical filters are applied in order to decrease the number of alignments - the most time consuming element of the clustering algorithm. These are ‘short word’ filters that are based on the following assumption: Two similar proteins share the same number of types of dipeptides, tripeptides, and so on. Therefore the pairs of sequences that do not satisfy this condition do not have to be aligned [6, 13, 14]. The alignment of two sequences that have satisfied the conditions imposed by the “short word” filters is done with the Smith-Waterman algorithms [15], which is able to delineate a biologically meaningful local alignment even if two sequences differ greatly in their length. Given the optimal alignment, the sequence identity is computed as the ratio between the number of identities and the length of the sequence which is not yet a member of any existing cluster. The identity threshold limit that must be overreached to insert a new sequence into a cluster is given by the user [16].Pisces:This program does not provide the user with complete clusters, instead it outputs a list of cluster representatives. Other cluster members are omitted. Pisces uses the Sander and Holbohm [1] method to create non-redundant datasets. The first sequence of the input dataset is flagged as included in the non-redundant output dataset. This is a cluster representative sequence. Each subsequent sequence in the input dataset is flagged as excluded if it has a pairwise sequence identity with the first sequence lower than the user defined threshold. The excluded sequences then form a new dataset and the procedure repeats until all sequences are clustered. Pisces can use a combination of structural alignment at low sequence identity and sequence alignment at high sequence identity. Structural alignments are calculated using the CE program [17] while PSI-BLAST [9] is used for sequence alignment. If the input contains only sequences, the structural alignments are obviously bypassed. The sequence identity is defined as the number of identical pairs divided by all aligned pairs excluding gaps, if any.BlastClust (BLAST):The algorithm starts by pairwise comparison of all sequences using BLAST. For each pairwise comparison BLAST calculates two values ‘coverage’ and ‘score density’. The ‘coverage’ is defined as max(Cx,Cy) or min(Cx,Cy), depending on user decision, where Cx (Cy) is the ratio between the length of the high-scoring-segment-pair on sequence x (y) and the length of sequence x (y). ‘Score density’ is defined as the ratio between the number of identical residues and the length of the alignment including gaps, if any. Alternatively ‘score density’ can be defined as ratio between the BLAST score and min(HxHy) where Hx (Hy) is the length of the high-scoring-segment-pair on sequence x (y).If these two values are above a certain threshold the two sequences that are compared are considered to be neighbors. In such way, a neighbor relationship list of all input sequences is determined. This list is inputted into a single-linkage clustering process. This clustering method starts with a first sequence as a cluster representative and puts any other sequence into that cluster if the sequence is a neighbor of at least one sequence already in the cluster. All remaining (not clustered) sequences are stored in the new list and the same procedure is applied again. BlastClust repeats this procedure until all sequences are clustered.SkipRedundant (EMBOSS):With this method, all pairwise sequence alignments are calculated using the EMBOSS implementation of the Needleman-Wunsch global alignment algorithm [18]. The program can use two procedures for removing redundant sequences: (i) If a pair of proteins achieve a percentage of sequence identity greater than a threshold (specified by the user) the shortest sequence is discarded; (ii) If a pair of proteins have a percentage of sequence identity that lies outside a range (specified by the user) the shortest sequence is discarded. After the sequences have been removed the list contains only non-redundant entries.Results and discussion:In the following sections the results will be presented and discussed in three parts. First, the attention will be focused on some general features of the various computer programs and in particular it will be shown that all of them allow one to correctly remove sequence redundancy. Then, it will be examined what happens when the redundancy reduction becomes more and more severe by using the same computer program and it will be shown that all the programs present similar trends at this regard. Eventually, the attention will be focused on the comparison of the results obtained by using different methods and it will be shown that some differences may be observed on the outputs of different computer programs.ISSN 0973-2063 (online) 0973-8894 (print)236Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical InformaticsFigure 1: Pairwise percentages of identity calculated on the non-redundant set using the Needleman-Wunsch algorithm. Non-redundant sets were obtained using cd-hit program with max PID = 40%. Similar results were obtained for Decrease redundancy, Pisces and BlastClust.Figure 2: Venn diagram. Overlap of four non-redundant datasets, each obtained with a different program, based on the same input dataset (D_100_100) and the same PID (40%). 95 sequences are common to the non-redundant outputs of BlastClust, cd-hit, Decrese redundancy, and Pisces.General considerations:The programs listed in Table 1 (see supplementary material) have been tested using the datasets extracted from UniProt database (Table 2, see supplementary material). Each program used four different PID thresholds, 40%, 50%, 75% and 90%. Smaller and more stringent values of PID were disregarded since they cannot be used by some of the programs of Table 1 (see supplementary material). As expected, if the PID threshold increases, the non-redundant datasets become larger, independently of the program. Depending on the selected PID threshold, 40%, 50%, 75% and 90%, the output dataset is in average reduced to 90%, 92%, 88% and 96% of the input dataset respectively. Moreover, the number of sequences in the non-redundant datasets, obtained by different programs fed with the same input datasets and PID thresholds are very similar. For example in the case of the D_100_500 test set with 40% PID the number of sequences in the non-redundant dataset is 97, 97, 96 and 97 for Decrease Redundancy, cd-hit, Pisces and BlastClust respectively. Table 4 (see supplementary material) shows the percentage of sequences found in the output relative to the input (Ptot) at various PID threshold values. All the programs have similar Ptot values for the same PID with the exception of SkipRedundant which showed lower Ptot for PID 90%. Not surprisingly, smaller Ptot values are observed for smaller and more stringent PID thresholds. Moreover, we did not observe any correlation between the length of the protein sequences in the input datasets and the resulting non-redundant outputs. All the programs show a closely similar behavior at this regard. Furthermore, we examined the level of sequence similarity within each non-redundant dataset. We used both the Smith-Waterman (local alignment) and Needleman-Wunsch (global alignment) method and we observed some differences in the output of different computer programs. The average identity is in the range of 23% to 42% and 15% to 21% for Smith-Waterman and Needleman-Wunsch method respectively. An example of the distribution of pairwise identity in non-redundant datasets (calculated using max. PID = 40%) is given in Figure 1.Our study showed inconclusive data for the program SkipRedundant. For percentages of identity of 50% and lower, independently of the input dataset, the program reported results containing only few cluster representatives which were not further analyzed. Therefore the results obtained by this program with percentages of identity of 40% and 50% are not taken into further consideration in this study.These results clearly indicate that all the programs, even within the limitations shown by some of them, are able to produce dataset of sequences that are really non-redundant, as far as the redundancy is related to the level of sequence similarity. Apparently, therefore, any of these programs can be used and there is no reason to prefer one or the other. Overlaps at different thresholds:Previously, we have shown that the size of the non-redundant datasets increases with the percentage of identity threshold used by the programs.For example there are 91 sequences outputted by Pisces fed with theISSN 0973-2063 (online) 0973-8894 (print) 237Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical Informaticsdataset D_100_800 if the PID threshold is 40% while 92 sequences are outputted if the threshold is 50%. It is also interesting to examine the overlap between these two datasets of 91 and 92 sequences, produced by the same program fed with the same input and with different PID thresholds. The overlap is measured as the percentage of the proteins of the smaller dataset that are observed also in the larger dataset. The results show that the overlap is in most cases 100%. Although in few cases this value is slightly smaller than 100%, it is never smaller than 96%.Alternatively, this can be described as the invariance of the output content on the progressive strengthening of the non-redundancy threshold: if the PID threshold is made more stringent, for example by lowering it from 50% to 40%, the sequences that are retained in the 40% non-redundant output were already present in the 50% output. This can be explained by the fact that the number of sequences in the output is dependent of the percentage of identity threshold defined by the user but the selection of the cluster representatives is independent of that same threshold.Overlap between different computer programs:A crucial issue is the comparison between the outputs of different programs fed with the same input dataset and the same PID threshold value. The overlap between two non-redundant datasets is measured as the percentage of proteins of the smaller dataset that are found in the larger dataset. Table 5 shows the overlap values between different programs and for the same threshold values. The average overlap is around 90%, ranging from 88% to 100%.The discrepancy between the results shown in Table 5 can be explained by several facts; first, different programs use different alignment algorithms – this particularly refers to SkipRedundant which uses global alignment while the others use local alignment; second, even if two or more programs use the same alignment algorithm, the fine tuning of the algorithm can be different; third, the selection of cluster representatives is done in different ways, depending on the clustering algorithm.An example of overlap of four non-redundant datasets, each obtained with a different program, based on the same input dataset and the same PID threshold, is given in Figure 2. This figure supports the findings that the non-redundant sets obtained by different programs fed with the same input dataset and maximum PID have a considerable degree of similarity in size and content.Conclusion:A large scale comparison of various computer programs that are commonly used to remove redundancy from protein sequence databases has been performed. Different computational approaches clearly produce slightly different results. If this is not completely unexpected, since several differences are observed in all these algorithms, it is nevertheless intriguing. The preference for a program is largely dependent on technical issues like the availability of a simple and user friendly stand alone executable, which is particularly attractive for large scale studies, rather than the availability of a web based server, which eliminate the problems to install local copies of the software. Most of the bioinformaticians assume that redundancy reduction is a routine and simple step, which canbe performed with any of the available programs. However, we have documented that the lists of non-redundant protein sequences outputted by different programs are different, even when the redundant input set of sequences is the same and the threshold of percentage of sequence identity is the same. Discrepancies up to about 10% are quite common.This does not indicate that these computer programs have difficulties in removing the redundancy. In fact, all of their outputs are more than acceptable in terms of residual similarity between the entries that are grouped in the outputs. However, this clearly suggests that a good practice in bioinformatics should be the use of more than one computer application for removing redundancy from protein sequence ensembles. In this way, all the computations would be done in parallel by using two or more non-redundant sets of sequences and the comparison of the final results of the computations would reinforce their intrinsic value, a sort of precaution to avoid possible biases and mistakes. It is eventually important to point out that it is impossible to rank the different programs according to the quality of their outputs. To do it, it would be necessary to have a benchmark dataset, which can be produced only by using the same programs that we compared. Any other benchmark, constructed with human intervention, would be biased by subjectivity.Acknowledgements:Funding from BIN-II and BIN-III (GEN-AU Austrian research program) is gratefully acknowledged. Grant from the Ministry of Science, Republic of Croatia, number 036-0362214-1987 is gratefully acknowledged.References:[1] U Hobohm et al . Protein Sci 1: 409 (1992) [PMID: 1304348] [2] O Carugo. Protein Sci 17: 2189 (2008) [PMID: 18780815][3] A Cornish-Bowden. Biochem J. 213: 271 (1983) [PMID: 6615430] [4] R Apweiler et al. Nucleic Acids Res 32: D115 (2004) [PMID:14681372][5] E Gasteiger et al . Nucleic Acids Res 31: 3784 (2003) [PMID:12824418][6] W Li et al. Bioinformatics 22: 1658 (2006) [PMID: 16731699] [7] G Wang et al . Nucleic Acids Res 33 (2005) [PMID: 15980589] [8] G Wang et al . Bioinformatics 19: 1589 (2003) [PMID: 12912846] [9] SF Altschul et al. Journal of Molecular Biology 215: 403 (1990)[PMID: 2231712][10] D Wheeler et al. (2007) [PMID: 17993672][11] P Rice et al. Trends in Genetics 16: 276 (2000) [PMID: 10827456] [12] M Cameron. Structure 12: 737 (2004) [PMID: 15130466] [13] W Li et al. Bioinformatics 17: 282 (2001) [PMID: 11294794] [14] W Li et al . Bioinformatics 18: 77 (2002) [PMID: 11836214][15] TF Smith et al . Journal of Molecular Biology 147: 195 (1981)[PMID: 7265238][16] L Holm et al. Bioinformatics 14: 423 (1998) [PMID: 9682055][17] I Shindyalov et al . Protein Engineering 11: 739 (1998) [PMID:9796821][18] S Needelman et al . Journal of Molecular Biology 48: 443 (1970)[PMID: 5420325]Edited by M GolleryCitation: Kresimir & Oliviero, Bioinformation 5(6): 234-239 (2010)License statement: This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercialpurposes, provided the original author and source are credited.ISSN 0973-2063 (online) 0973-8894 (print) 238Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical InformaticsSupplementary material:Table 1: List of the computer programs with their URLs.Program Version URL Decrease RedundancyN/A/tools/redundancycd-hit 3.1.1 /cd-hit Pisces N/A /PISCES.php BlastClust (BLAST) 2.2.16 SkipRedundant (EMBOSS)6.2.0Table 2: Summary information on the datasets (nres indicates the number of residues). Dataset name Dataset content D_100_100 100 sequences with 100 < nres ≤ 200 D_100_200 100 sequences with 200 < nres ≤ 300 D_100_300 100 sequences with 300 < nres ≤ 400 D_100_400 100 sequences with 400 < nres ≤ 500 D_100_500 100 sequences with 500 < nres ≤ 600 D_100_600 100 sequences with 600 < nres ≤ 700 D_100_700 100 sequences with 700 < nres ≤ 800 D_100_800 100 sequences with 800 < nres ≤ 900 D_100_900 100 sequences with 900 < nres ≤ 1000 D_100_1000 100 sequences with nres > 1000D_1000_0 1000 sequences with nres ≤ 100 D_1000_100 1000 sequences with 100 < nres ≤ 200 D_1000_200 1000 sequences with 200 < nres ≤ 300 D_1000_300 1000 sequences with 300 < nres ≤ 400 D_1000_400 1000 sequences with 400 < nres ≤ 500 D_1000_500 1000 sequences with 500 < nres ≤ 600 D_1000_600 1000 sequences with 600 < nres ≤ 700 D_1000_700 1000 sequences with 700 < nres ≤ 800 D_1000_800 1000 sequences with 800 < nres ≤ 900 D_1000_900 1000 sequences with 900 < nres ≤ 1000 D_1000_1000 1000 sequences with nres > 1000D_10000_0 10000 sequences with nres ≤ 100 D_10000_100 10000 sequences with 100 < nres ≤ 200 D_10000_200 10000 sequences with 200 < nres ≤ 300 D_10000_300 10000 sequences with 300 < nres ≤ 400 D_10000_400 10000 sequences with 400 < nres ≤ 500 D_10000_500 10000 sequences with 500 < nres ≤ 600 D_10000_600 10000 sequences with 600 < nres ≤ 700 D_10000_700 10000 sequences with 700 < nres ≤ 800 D_10000_800 10000 sequences with 800 < nres ≤ 900 D_10000_900 10000 sequences with 900 < nres ≤ 1000 D_10000_1000 10000 sequences with nres > 1000Table 3: The main features of the different computer programs that were used.Program name Stand alone (OS) % sequence identity threshold Output is dependenton the input orderOutput formatDecrease Redundancy No (any value)Yes FASTAcd-hit Yes (Linux, Windows) 40 – 100(any value)Yes FASTAPisces Yes (Linux) 5 - 100(any value)No List of identification codesBlastClust Yes (Linux, Windows) 0 – 100(any value)No List of identification codesSkipRedundant Yes (Linux) 0 – 100(any value) Yes FASTAISSN 0973-2063 (online) 0973-8894 (print) 239Bioinformation 5(6): 234 - 239 (2010)© 2010 Biomedical InformaticsTable 4: The percentage of sequences found in the output relative to the input (Ptot). The thresholds of percentage of sequence identity are indicated as ‘Max PID’. These data are the averages of the results obtained with all datasets. Program Max PID 40% Max PID 50% Max PID 75% Max PID 90% Decrease redundancy Ptot = 95% Ptot = 96% Ptot = 97 % Ptot = 99% cd-hit Ptot = 88% Ptot = 91% Ptot = 94% Ptot = 98% Pisces Ptot = 88% Ptot = 91% Ptot = 95 % Ptot = 98 % BlastClustPtot = 89 % Ptot = 91% Ptot = 94% Ptot = 98 % SkipRedundantPtot = - *%Ptot = -*%Ptot = 60%Ptot = 68%* Despite several attempts, the program reported results containing few clusters which were not further analyzed.Table 5: Average overlap (standard deviation) between the outputs of different programs observed at different thresholds of sequence identity - Max PID. Averages and standard deviations were computed by using all the data sets. Max PID 40% Decrease redundancy cd-hit Pisces BlastClust Skip Redundant Decrease redundancy 100% 88% (6) 89% (5) 89% (5) N/A cd-hit 100% 95% (2) 95% (3) N/A Pisces 100% 95% (3) N/A BlastClust 100% N/A Skip Redundant N/A N/A N/A N/A N/A Max PID 50% Decrease redundancy cd-hit Pisces BlastClust Skip Redundant Decrease redundancy 100% 89% (5) 90% (5) 90% (3) N/A cd-hit 100% 96% (2) 94% (1) N/A Pisces 100% 97% (1) N/A BlastClust 100% N/A Skip Redundant N/A Max PID 75% Decrease redundancy cd-hit Pisces BlastClust Skip Redundant Decrease redundancy 100% 90% (4) 90% (4) 92% (4) 91% (5) cd-hit 100% 96% (1) 95% (2) 99% (1) Pisces 100% 98% (1) 97% (2) BlastClust 100% 97% (2) Skip Redundant 100% Max PID 90% Decrease redundancy cd-hit Pisces BlastClust Skip Redundant Decrease redundancy 100% 92% (4) 92% (4) 95% (3) 94% (4) cd-hit 100% 95% (1) 96% (1) 99% (1) Pisces 100% 98% (1) 97% (1) BlastClust 100% 97% (1) Skip Redundant 100%。
比较基因组学英语Title: Comparative Genomics: Unraveling the Genetic Mysteries.Article:Comparative genomics is a rapidly advancing field of study that involves the comparison of genetic information across different species to uncover the underlying genetic similarities and differences. This approach has revolutionized our understanding of the genetic makeup of various organisms and has provided valuable insights into evolutionary relationships, genetic diversity, and the functional significance of genes.One of the key goals of comparative genomics is to identify the genetic basis of traits and diseases by examining the similarities and differences in the genetic sequences of different organisms. By comparing the genomes of closely related species, researchers can pinpoint thegenetic variations that contribute to specific traits or diseases. This information is crucial for understanding the genetic basis of complex traits and for developing targeted therapies and interventions.Moreover, comparative genomics has shed light on the evolutionary history of different species and has provided evidence for common ancestry and shared genetic elements.By comparing the genomes of diverse organisms, scientists can reconstruct the evolutionary relationships and tracethe genetic changes that have occurred over millions of years. This has not only deepened our understanding of the evolutionary process but has also provided importantinsights into the mechanisms driving genetic diversity and adaptation.In addition, comparative genomics has played a crucial role in identifying conserved genetic elements andfunctional genes that are shared across different species. By analyzing the genetic sequences of multiple organisms, researchers can identify genes that are essential for basic biological processes and are conserved throughout evolution.This knowledge is invaluable for understanding the fundamental genetic mechanisms that underpin life and for elucidating the genetic basis of various biological functions.Furthermore, comparative genomics has paved the way for the development of new technologies and tools for studying genetic variation and function. The comparison of genomes has led to the identification of genetic markers, regulatory elements, and functional genes that can be used for a wide range of applications, including genetic engineering, disease diagnosis, and conservation efforts.In conclusion, comparative genomics has revolutionized our understanding of the genetic basis of life and has provided valuable insights into the genetic similarities and differences across different species. This field of study continues to advance our knowledge of genetics and genomics and holds great promise for addressing key biological questions and challenges in the future.。
Applied Catalysis B:Environmental 142–143 (2013) 677–683Contents lists available at SciVerse ScienceDirectApplied Catalysis B:Environmentalj o u r n a l h o m e p a g e :w w w.e l s e v i e r.c o m /l o c a t e /a p c a tbComparison of the performance for oxidation of formaldehyde on nano-Co 3O 4,2D-Co 3O 4,and 3D-Co 3O 4catalystsBingyang Bai,Hamidreza Arandiyan,Junhua Li ∗State Key Joint Laboratory of Environment Simulation and Pollution Control,School of Environment,Tsinghua University,Beijing 100084,Chinaa r t i c l ei n f oArticle history:Received 3February 2013Received in revised form 26April 2013Accepted 22May 2013Available online xxxKeywords:Co 3O 4FormaldehydeCatalytic combustion Hard templateThree-dimensional channela b s t r a c t2D-Co 3O 4and 3D-Co 3O 4catalysts were prepared by the hard template method,and nano-Co 3O 4was synthesized by precipitation method.The catalytic activity for the oxidation of formaldehyde over various types of catalysts was investigated.The 3D-Co 3O 4catalyst attained a 100%conversion rate of formaldehyde at 130◦C with a space velocity of 30,000mL/(g h),while the 2D-Co 3O 4catalyst oxidized formaldehyde completely at 150◦C in the same space velocity conditions.The difference in activity is due to the clear channel structure of the mesoporous Co 3O 4prepared by the hard template method,which has large specific surface area and surface active species that allows the reactant to diffuse and undergo surface reactions.The 3D-Co 3O 4had the best performance of formaldehyde oxidation due to the three-dimensional porous channel structure,larger specific surface area,abundant active surface oxy-gen species and active Co 3+cationic species on the exposed (220)crystal plete conversion of formaldehyde had remained the same after 3D-Co 3O 4was observed for 160h.Therefore,the 3D-Co 3O 4catalyst has the best catalytic activity and stability for formaldehyde,which might be a non-noble catalyst for catalytic removal of formaldehyde in practical application.© 2013 Elsevier B.V. All rights reserved.1.IntroductionIn recent years,much attention has been attracted to the control of volatile organic compounds (VOCs)from the chemical indus-try,building materials,coatings,motor vehicle,etc.Formaldehyde emitted from the widely used building and decorative materials is becoming a major indoor pollutant,and it also has photochemi-cal activity in the atmosphere.Formaldehyde of low concentration in airtight buildings could cause serious and hazardous effects on human health.It has been deemed a carcinogenic and teratogenic substance [1,2].Due to effects of human health and atmospheric environment,it is essential to remove and transfer to CO 2in indoor air and industrial and automobile exhaust gas.Porous materials with physical adsorption were used to elim-inate formaldehyde emission,but the efficiency of removal was not excellent because of the limited capacities [2,3].Catalytic com-bustion can be found to remove the formaldehyde for indoor air purification.This method has many advantages,such as high removal efficiency,a low light-off temperature,a wide range of applications,simple operation of equipment,and no secondary pollution.Currently,the catalytic materials used in formaldehyde catalytic oxidation are mainly oxide-supported precious metal∗Corresponding author.Tel.:+861062771093;fax:+861062771093.E-mail address:lijunhua@ (J.Li).catalysts,such as Pt/TiO 2[2–4],Pt/MnO 2[5],Pt/Fe 2O 3[6],Pt/SiO 2[7],Pt/MnO x –CeO 2[8],Ag/HMO [9],Ag/SBA-15[10],Ag/SiO 2[11],Ag/MnO x –CeO 2[12],Au/CeO 2[13–15],Au/ZrO 2[16],Au/Fe 2O 3[17],Au/Co 3O 4–CeO 2[18],Au/CeO 2–Co 3O 4[19],Pd/TiO 2[20],Pd/Beta [21]and Pd–Mn/Al 2O 3[22].In addition,perovskite type metal oxides as catalysts for the oxidation of formaldehyde have been reported [23].The activity of supported noble metals (Pt,Ag,Au,Pd)is superior,but the high cost is prohibitive.Metal oxide cat-alysts are cheap,exhibit sufficient activity and are more practical.Catalytic materials with the same composition but different struc-ture or morphology show diverse catalytic activity and expose the active site to varying extents [24,25].Co 3O 4demonstrates excellent catalytic performance and is widely used in various fields [26–28].Co 3O 4catalytic materials can have different morphologies,including tube,sheet,belt,rod,sphere and pore [29–31].The reported results show that the different morphologies and structures of Co 3O 4promote different chemi-cal reactions and catalytic abilities because of the surface exposure of the active position.The research of Xie et al.[25]showed that CO can be easily oxidized by the sufficient Co 3+species exposed on the (110)face of a Co 3O 4nano-rod.Hu et al.[29]synthesized nano-sheet,nano-belt and nano-cubic catalysts.The results indi-cated that the (112)face of the nano-sheet had excellent methane oxidation activity.Ma et al.[18]prepared catalysts with SBA-15as a hard template.The results showed that the (110)face com-posed of Co 3+is active for the formaldehyde oxidation reaction and0926-3373/$–see front matter © 2013 Elsevier B.V. All rights reserved./10.1016/j.apcatb.2013.05.056678 B.Bai et al./Applied Catalysis B:Environmental142–143 (2013) 677–683that oxidation ability is connected with the surface oxygen species. Therefore,it is meaningful and significant to research the charac-teristics of Co3O4catalysts with the same components and different structures in the formaldehyde oxidation reaction and to investi-gate whether the three-dimensional porous channels of3D-Co3O4 can increase the catalytic activity at low temperature.In this arti-cle,2D-Co3O4,3D-Co3O4and nano-Co3O4catalysts were prepared, and their structures were characterized by XRD,BET,TEM,O2-TPD, H2-TPR and XPS.The performance of the catalysts was evaluated in a microtype evaluation device to evaluate the activity of the mesoporous Co3O4catalysts for the conversion of formaldehyde.2.Experimental2.1.Catalyst preparation2.1.1.Synthesis of SBA-15silicaSBA-15was synthesized under acidic conditions using tetraethoxysilane(TEOS)as the silica source and Pluronic P123 (EO20PO70EO20)as the structure-directing agent[32].In a typical synthesis,P123(8.0g)was dissolved in180g of deionized water and120g of HCl(4M)solution in a three-neck round-bottomflask with stirring.9.1mL of tetraethoxysilane(TEOS)was slowly added to the acid solution using a dropping funnel.The liquid mixture was stirred at room temperature for24h,and then it was transferred to a Teflon-lined stainless steel autoclave at100◦C for24h.The white product was washed,air-dried at100◦C and calcined at550◦C for 5h to completely eliminate the template.The resulting powder was two-dimensional SBA-15molecule sieves.2.1.2.Synthesis of KIT-6silicaHigh quality mesoporous cubic(ia3d)silica material was syn-thesized using tetraethoxysilane(TEOS)as the silica source and Pluronic P123(EO20PO70EO20)as the structure-directing agent [33].In a typical synthesis,P123(1.2mmol,7.2g),hydrochloric acid(37%,13.9g)and n-butanol(94.5mmol,7.0g)were fed into a500mL round-bottomflask and stirred for1h.The temperature was kept at38◦C in synthesis process.TEOS(7.0g)was added,and the solution was stirred for another24h.The solution was trans-ferred to a Teflon-lined stainless steel autoclave at100◦C for24h. The mixture liquid was washed with deionized water andfiltered several times after the hydrothermal treatment.The sample was dried at100◦C and calcined at550◦C for5h to completely eliminate the template.The white mesoporous KIT-6was obtained.2.1.3.Nanocasting preparation of mesoporous2D-Co3O4and3D-Co3O4Mesoporous Co3O4was prepared using2D porous SBA-15and 3D porous KIT-6as the hard template with ethanol as the dispers-ing agent.In a typical synthesis,3.0g of SBA-15or KIT-6molecular sieve were added to a Co(NO3)2·6H2O ethanol solution(0.84mol/L, 30mL).The samples were evaporated to dryness at80◦C.The prod-ucts were calcined at200◦C for6h.The above steps about casting and evaporating were repeated.Finally,the materials were cal-cined at450◦C for6h.The SBA-15and KIT-6hard templates were removed using a2mol/L NaOH solution.Centrifugal separation was used to eliminate sodium silicate,and the samples were dried at 100◦C.The obtained powder was2D-Co3O4or3D-Co3O4.2.1.4.Preparation of nano-Co3O4Nano-Co3O4was prepared by the precipitation method[34].A Co(NO3)2·6H2O solution(0.37mol/L,20mL)was slowly added to an Na2CO3solution(1.25mol/L,8mL).The mixture was stirred for 12h and then washed,filtered,and dried at100◦C.The resulting Co(OH)2was calcined at400◦C for4h to obtain nano-Co3O4.2.2.Catalyst characterizationXRD patterns were measured on a TTR3type X-ray diffractome-ter using a Cu K␣ray radiation source with a0.05◦/min scanning speed,40kV tube voltage and40mA tube current.The2Âof the low-angle XRD ranged from0.6to5◦,and the2Âof the wide-angle ranged from10to80◦.The structural parameter,pore size distri-bution and N2adsorption isotherms of the samples were measured at liquid nitrogen temperature using an Autocorb-1MP appara-tus.The samples underwent vacuum treatment at300◦C for4h before testing.The N2adsorption–desorption isotherm used the Barrett–Joyner–Halenda(BJH)method.TEM image was taken on JEM-2011LaB6instrument at a voltage of200kV.The samples were prepared by ultrasonic dispersion in ethanol and were dispersed for8min,and the transparent suspended droplets were placed on a copper grid using a capillary.The H2-TPR was tested on a Chemisorb 2720TPX apparatus using a temperature range of50–900◦C with a heating rate of10◦C/min.The catalysts were pretreated in the N2flow at300◦C for1h in a quartz reactor prior to testing.The O2-TPD was also measured on the above instrument.The cata-lysts were treated at300◦C with50mL/min of He(5%of O2)for 1h.The samples adsorbed enough O2when the treatment temper-ature decreased below80◦C,at which point the carrier gas was changed to pure He.The temperature was programmed to increase to1000◦C at a rate of10◦C/min.The XPS patterns were tested on a PHI-5300/ESCA electronic energy spectrum at300W using Mg Ka X-rays as the excitation source.The data were processed by the XPS-PEAK software.2.3.Evaluation of catalytic activityThe catalytic oxidation activity on formaldehyde was tested in a fixed bed quartz tube reactor(˚10mm)with0.2g catalyst(40–60 mesh).Formaldehyde gas was generated and injected using a N2 bubbler in a low temperature thermostatic bath at0◦C that passed through a containerfilled with formalin(an aqueous solution of 37%HCHO).The totalflow rate through the reactor was kept at 100mL/min by mass-flow meters and included400ppm formalde-hyde,20%(vol)of O2and N2equilibrium gas.The space velocity of the catalytic oxidation was30,000mL/(g h).The products of the reaction were analyzed online by an Agilent7890A gas chromato-graph with a TCD detector and a Porapak-Q column.No carbon products other than CO2were detected.The HCHO conversion was calculated from the CO2content as follows:HCHO conversion(%)=[CO2]out[HCHO]in×100[CO2]out and[HCHO]in in the formula are the CO2concentration in the products and the HCHO concentration of theflow gas,respec-tively.3.Results and discussion3.1.The activity of various catalysts for formaldehyde oxidationThe formaldehyde catalytic oxidation activities of the different Co3O4catalysts are shown in Fig.1.With an increase in tempera-ture,the nano-Co3O4catalyst displays the worst catalytic activity, completely converting HCHO at230◦C,the2D-Co3O4catalyst has better oxidation activity,entirely converting HCHO at150◦C,and the3D-Co3O4sample shows the best catalytic oxidation,entirely converting HCHO at130◦C.The results indicate that the meso-porous materials have an advantage because of their structure.The three dimensional porous channels and the large surface area of the3D-Co3O4is highly conducive to formaldehyde oxidation.Fig.2 shows HCHO catalytic activity of normalized by BET surface areasB.Bai et al./Applied Catalysis B:Environmental 142–143 (2013) 677–683679Table 1Porous structure parameter and surface composition of the different Co 3O 4catalysts.SampleSurface area (m 2/g)Pore volumePore diameterCobalt (mol%)Oxygen (mol%)A BETA BJH V p (cm 3/g)D P (nm)Co 3+Co 2+O ads O latt Nano-Co 3O 428.1–––25.174.948.251.82D-Co 3O 443.348.80.013 4.7832.967.146.153.93D-Co 3O 485.9104.50.0143.8440.959.147.452.6H C H O C o n v e r t i o n / %Tempera ture / oCFig.1.Formaldehyde catalytic performance of the different Co 3O 4catalysts underthe following conditions:HCHO concentration =400ppm,20vol%O 2,N 2as balance gas,GSHV =30,000mL/(g h).(Table 1).It is observed that normalized activity of the 3D-Co 3O 4is much better than the other catalysts after deducting surface areas.Fig.3shows the influence of airspeed for the formaldehyde catalytic activity of 3D-Co 3O 4catalyst.From the chart,light-off temperature of formaldehyde gradually raises,with airspeed increasing from 30,000mL/(g h)to 6,0000mL/(g h).However,when space velocity reached 60,000mL/(g h),the temperature of complete conversion of formaldehyde was at 160◦C.This result indicates that the per-formance of 3D-Co 3O 4is clearly influenced by space velocity.The formaldehyde catalytic performances with time on stream for dif-ferent Co 3O 4catalysts are displayedin Fig.4.The conversion of formaldehyde had remained the same after these catalysts were observed for 160h.The complete conversion of 3D-Co 3O 4always kept at 130◦C.It indicates that the 3D-Co 3O 4catalyst is highly stable in this condition.N o r m a l i z e d H C H O C o n v e r t i o n / % m-2Tempe rature / oCFig. 2.Formaldehyde catalytic performance of the different Co 3O 4catalystsnormalized by BET surface area under the following conditions:HCHO concentra-tion =400ppm,20vol%O 2,N 2as balance gas,GSHV =30,000mL/(g h).20406080100C o n v e r t i o n / %Temperature / oCFig.3.Formaldehyde catalytic performance of different space velocity for 3D-Co 3O 4catalyst under the conditions of HCHO concentration =400ppm,20vol%O 2,N 2as balance gas.3.2.Textural characterization of catalystsThe catalysts were characterized with XRD,N 2-physisorption and TEM.The wide-angle and low-angle XRD patterns of the Co 3O 4catalysts are displayed in Fig.5.The 3D-Co 3O 4catalyst showed the (211),(220),and (332)diffraction peaks correspond to 1◦,1.14◦and 1.85◦(2Â)[31].The peaks indicate that 3D-Co 3O 4is a mesoporous material with a three-dimensional porous structure characteristic of the KIT-6template (ia3d)[33,35].The 2D-Co 3O 4catalyst had (100)peak at 1◦(2Â),which demonstrates that 2D-Co 3O 4has the structural characteristics of SBA-15(p6mm)mesoporous material [33].The nano-Co 3O 4showed no diffraction peak because it is a non-perforated material.From the wide-angle XRD image,the different Co 3O 4catalysts all had diffraction peaks at 19◦,31.3◦,36.9◦,38.2◦,44.5◦,55.6◦,59.4◦and 65.3◦(2Â)[36],C o n v e r t i o n / %Time on strea m / hFig.4.Formaldehyde catalytic performance with time on stream over the differentCo 3O 4catalysts under the conditions of temperature =130◦C,HCHO concentra-tion =400ppm,20vol%O 2,N 2as balance gas,GSHV =30,000mL/(g h).680 B.Bai et al./Applied Catalysis B:Environmental 142–143 (2013) 677–683R e l a t i v e i n t e n s i t y2θ/ºFig.5.Low-angle and wide-angle XRD patterns of the different Co 3O 4catalysts:(a)nano-Co 3O 4,(b)2D-Co 3O 4,(c)3D-Co 3O 4.corresponding to the (111),(220),(311),(222),(400),(422),(511)and (440)planes.The 3D-Co 3O 4and 2D-Co 3O 4prepared by the hard template method and the nano-Co 3O 4synthesized by the precipitation method are all the crystalline cobalt oxide with spinel type structure.The N 2adsorption–desorption isotherm and the pore size dis-tribution patterns of the mesoporous Co 3O 4catalysts are shown in Fig.6.The results of the N 2-physisorption demonstrate that the 2D-Co 3O 4and 3D-Co 3O 4materials exhibit the hysteresis phenomenon that belongs to the type IV isotherms,therefore,mesoporous struc-ture present in the catalytic materials [35,37,38].These results are consistent with the low-angle XRD image.The hysteresis ring of the 2D-Co 3O 4is smaller than that of the 3D-Co 3O 4.Perhaps the 2D-Co 3O 4and 3D-Co 3O 4catalysts have different porous channel structures [18,31],thus the specific surface area of 3D-Co 3O 4is larger than that of 2D-Co 3O 4.In addition,the type IV isotherm is less well defined for polycrystalline material.The isotherms are similar to those observed for other mesoporous transition metal oxides formed by hard template [38,39].The hysteresis ring shapes of mesoporous Co 3O 4catalysts are absolutely unlike mesoporous silicon as their hard template,which may be associated with a contribution from interparticle voids [39].The BJH pore size distri-butions of mesoporous materials,calculated from the desorption0306090120150180A d s o r b e d v o l u m e (c m 3/g )Relative press ure (P/Po)Fig.6.N 2Adsorption–desorption isotherm and pore size distributions of the meso-porous Co 3O 4catalysts:(a)2D-Co 3O 4,(b)3D-Co 3O 4.area,a 0.14cm 3/g pore volume and a 3.84nm pore diameter,and its large surface area is in agreement with the N 2-physisorption result.Fig.7presents the transmission electron microscope images of the Co 3O 4catalysts.From the chart,we can see that nano-Co 3O 4B.Bai et al./Applied Catalysis B:Environmental 142–143 (2013) 677–68368110020030040050060070 080Temperature / oCT C D S i g n a l(c)(b)(a)Fig.8.O 2-TPD patterns of the different Co 3O 4catalysts:(a)nano-Co 3O 4,(b)2D-Co 3O 4,(c)3D-Co 3O 4.is composed of single crystals with no hole (Fig.7a–b),whereas the 2D-Co 3O 4and 3D-Co 3O 4have polycrystalline hole walls.All of the catalysts show ordered mesopores (Fig.7c–h)and retain the ordered structure of the SBA-15or KIT-6template.The hole showed by Fig.7e–h of 3D-Co 3O 4is more apparent,which is consistent with the result of the low-angle XRD result.The nano-Co 3O 4has the (111)crystal plane with lattice spacing of 0.467nm.The 3D-Co 3O 4has the (111)crystal plane and the (220)crystal plane with lattice spacing of 0.286nm.The top left corner in Fig.7h shows the fast Fourier transform (FFT)of mesoporous 3D-Co 3O 4with [220]direction.The (111)crystal plane of nano-Co 3O 4is not an active surface [25,31],whereas the (220)crystal plane in parallel with the (110)crystal plane is an active surface.According to the lit-erature [25],the more active Co 3+species on the (110)faces of a Co 3O 4nano-rod can easily oxidize CO,and the conventional Co 3O 4nanoparticles had inferior CO oxidation activity because only Co 2+was exposed on the (001)and (111)faces.The nano-Co 3O 4only exposes the (111)crystal faces,while the 3D-Co 3O 4presents the (111)and (220)crystal planes.The (111)planes are composed of Co 2+ions which are not active sites,so nano-Co 3O 4has the worst oxidation performance.The (220)crystal planes are mostly com-posed of abundant Co 3+species and these Co 3+ions on the exposed (220)faces provide sufficient active sites for the oxidation reac-tion,so 3D-Co 3O 4catalyst shows excellent formaldehyde catalytic activity.Reactants were activated by Co 3+ions on the (220)facets when they diffused and adsorbed in the pores of 3D-Co 3O 4.There-fore,it is concluded that the number of Co 3+species on the exposed (220)facets is very important for oxidation reaction.3.3.Thermal desorption behavior of catalystsThe O 2-TPD patterns of the different Co 3O 4catalysts are shown in Fig.8.Generally speaking,the oxygen species of the oxide are desorbed from easiest to hardest as follows:oxygen molecule (O 2)>oxygen molecule anion (O 2−)>oxygen anion (O −)>lattice oxygen (O 2−).O 2−and O −are molecular adsorption oxygen and surface chemical adsorption oxygen,respectively,and belong to the surface active oxygen,which is easy to desorb from the metal oxide.It is extremely difficult for lattice oxygen to desorb from the metal oxide catalysts [40,41].Fig.8shows that desorption peaks that are less than 450◦C,between 450◦C and 700◦C,and more than 700◦C belong to the surface active oxygen,such as O 2−and O −,the surface lattice oxygen,and the bulk phase lattice oxy-gen,which all of the catalysts have,respectively.Except for the1502503504555065T C D S i g n a lTemperature / oC(c)(b)(a)Fig.9.H 2-TPR profiles of the different Co 3O 4catalysts:(a)nano-Co 3O 4,(b)2D-Co 3O 4,(c)3D-Co 3O 4.oxygen species greater than 700◦C,the nano-Co 3O 4had almost no active oxygen.The 2D-Co 3O 4had two desorption peaks but no peak at approximately 180◦C,which perhaps indicates a lack of O 2−species.The 3D-Co 3O 4catalyst presented three peaks,and the peak intensity was greater than for 2D-Co 3O 4,indicating that the 3D-Co 3O 4surface has abundant surface active oxygen species (O 2−and O −).This phenomenon probably attributes to the lattice defect and oxygen vacancy that result from a larger specific surface area and three-dimensional channel structure of the 3D-Co 3O 4sam-ple.It is beneficial for oxygen in the gas phase to be activated and adsorbed onto the solid surface.According to the literature [31,42],the desorption temperature and intensity of catalytic materials is connected to their catalytic oxidation activity.Lower beginning oxygen desorption temperatures and larger intensities of desorp-tion peaks lead to better catalytic ability.Therefore,3D-Co 3O 4has the best catalytic activity because of the abundance of active surface oxygen species that can easily participate in the catalytic oxidation reaction.3.4.Thermal reduction behavior of catalystsThe H 2-TPR patterns of the different Co 3O 4catalysts are illus-trated in Fig.9.The nano-Co 3O 4shows two reduction peaks at 320◦C and 400◦C,which belong to the Co 3+→Co 2+(low tem-perature section)and Co 2+→Co 0(high temperature section).The low temperature reduction peak intensity of nano-Co 3O 4is much smaller than its high temperature peak,which demonstrates that the quantity of Co 2+is greater than the quantity of Co 3+.The 2D-Co 3O 4and 3D-Co 3O 4have three reduction peaks at 300◦C,380◦C and 450◦C.300◦C peak belongs to the Co 3+→Co 2+.The 380◦C and 450◦C peaks belong to Co 2+→Co 0oxidations.The reduction peak intensity at 300◦C for 3D-Co 3O 4is greater than the inten-sity for 2D-Co 3O 4.It indicates that 3D-Co 3O 4possesses greater quantity of Co 3+.Abundant Co 3+ions possibly increase the anionic defect position,which results from larger surface areas and special porous channels and is beneficial to catalytic oxidation.The liter-ature reports that the quantity of Co 3+on the catalyst surface is correlated with catalytic activity [25,29,31].3.5.Surface composition of the different Co 3O 4catalystsFig.10is the Co and O X-ray photoelectron spectroscopy dia-gram of the different Co 3O 4catalysts.Fig.10A shows that O1s has signals displayed in BE at 529.8and 531.3eV.The reason is that the former is surface lattice oxygen (O latt ),whereas the latter is surface682 B.Bai et al./Applied Catalysis B:Environmental 142–143 (2013) 677–683528529530531532533534775780785790795800Binding energy(eV)I n t e n s i t y (A .U .)Fig.10.XPS patterns of the different Co 3O 4catalysts:(a)nano-Co 3O 4,(b)2D-Co 3O 4,(c)3D-Co 3O 4.adsorption oxygen (O ads )[43].There is little difference between thetwo in the XPS analysis,531.3–529.8eV =0.5eV.Table 1shows that there is little difference in the amount of surface adsorption oxy-gen and surface lattice oxygen between the catalysts.The O ads of nano-Co 3O 4is 48.2%,slightly greater than the mesoporous Co 3O 4,whereas O latt is 51.8%,slightly less than the mesoporous Co 3O 4.The O ads of 3D-Co 3O 4is slightly larger than the mesoporous 2D-Co 3O 4,whereas the O latt is slightly smaller than the 2D-Co 3O 4.The O 2-TPD results in Fig.8demonstrate that the reducing order of the contents of surface oxygen adsorption is 3D-Co 3O 4>2D-Co 3O 4>nano-Co 3O 4.However,the XPS showed that the reducing order is nano-Co 3O 4>3D-Co 3O 4>2D-Co 3O 4.Because XPS can only quantify elements on the materials’surface,perhaps the pore struc-ture and larger specific surface area of the mesoporous Co 3O 4catalysts do not have an edge.However,if the channel structure and the larger specific surface area in the bulk phase of the meso-porous materials are taken into consideration,the reducing order of the surface oxygen adsorption should agree with the O 2-TPD test results.Fig.10B shows that Co2p 3/2has two components at BE =778.9and 781.3eV and that Co2p 1/2also has two in BE =794.5and 796.9eV,[44]which are Co 3+and Co 2+ions,respectively.From Table 1,the reducing order on different Co 3O 4catalysts’surfaces is 3D-Co 3O 4>2D-Co 3O 4>nano-Co 3O 4.This result conforms to the H 2-TPR test results.If the channel structure and specific surface area in the bulk phase of the mesoporous catalysts is considered,there is likely more Co 3+total content than just the content of Co 3+ions on the surface.Therefore,mesoporous Co 3O 4,especially 3D-Co 3O 4,has a wealth of surface active oxygen species and Co 3+cationic species.According to the characterization results,mesoporous Co 3O 4catalysts,especially 3D-Co 3O 4,have the special pore structure,larger specific surface area,more abundant active surface oxygen species and active Co 3+cationic species on the exposed (220)crys-tal face.Xia et al.[43]considered that the activity of a catalyst was influenced by several factors,such as surface area,pore struc-ture,surface oxygen species,active phase and reducibility.Thespecial pore structure of mesoporous Co 3O 4is favorable for the adsorption and diffusion of reactants and pared with nano-Co 3O 4,2D-Co 3O 4and 3D-Co 3O 4have the 2D and 3D ordered pore structure,respectively,which is beneficial to the increase of surface areas.The BET specific surface areas of 2D-Co 3O 4and 3D-Co 3O 4are 43.3and 85.9m 2/g,respectively,which are much larger than that of nano-Co 3O 4.A catalyst with larger specific surface area can expose more active facets in the oxidation reaction.TEM results show that the active faces of 3D-Co 3O 4are the (220)crystal planes,which are mainly composed of abundant Co 3+ions which provide sufficient active sites for the oxidation reaction.More Co 3+ions are exposed on its surface,hence enhancing the catalytic abil-ity further.H 2-TPR and XPS results reveal that greater quantities of Co 3+ions exist on the surface of the 3D-Co 3O 4,followed by the 2D-Co 3O 4.Moreover,much more Co 3+species can probably increase the anionic defects which are beneficial to the absorption and activation of oxygen in the gas phase.O 2-TPD results show that mesoporous Co 3O 4,particularly 3D-Co 3O 4,have more suffi-cient surface active oxygen species which are easily stripped and quickly filled by gas phase oxygen,and can improve the oxida-tion capacity.Surface active oxygen species play a crucial role in oxidation reaction [45].For reaction mechanism of formaldehyde oxidation,Ma et al.[18]reported that the HCHO was first adsorbed on the Co 3O 4(110)surface and formed the CHO surface species,meanwhile the Co 3+cations were reduced to Co 2+.The CHO species were oxidized by surface active oxygen to form HCOO −species,the Co 2+cations were simultaneously oxidized to Co 3+,and oxygen in the gas phase was activated.Then the HCOO −species were further oxidized to produce CO 2.The mechanism might be appropriate for the oxidation of formaldehyde on 3D-Co 3O 4catalyst.Therefore,the overall catalytic performance of formaldehyde oxidation is related not only to the ratios of Co 2+/Co 3+and O ads /O latt ,but also correlated to the pore structure,surface area and exposure of the lattice plane of (111)or (220).The structure and properties of 3D-Co 3O 4are much more beneficial for formaldehyde oxidation,followed by the 2D-Co 3O 4.。
The Power of Comparative AnalysisComparative analysis is a valuable tool that enables us to gain a deeper understanding of subjects by comparing and contrasting them. This approach is widely used in various fields, including literature, science, history, and even daily life.In literature, for instance, comparative analysis can be employed to compare and contrast different works of the same author, or works from different authors, periods, or genres. By doing so, readers can appreciate the unique stylistic choices, themes, and motifs that authors employ, and how they contribute to the overall effect of the work.In science, comparative analysis is equally important. Scientists often compare and contrast different species, theories, or experiments to gain insights into the natural world. By identifying similarities and differences, they can make informed predictions, test hypotheses, and refine their understanding of scientific phenomena.In daily life, we also make use of comparative analysis unconsciously. For example, when shopping for a new car, we might compare and contrast different models, brands, and features to find the best fit for our needs. Similarly, when considering career options, we might compare job requirements, salaries, and potential growth opportunities to make an informed decision.The power of comparative analysis lies in its ability to help us see patterns, trends, and connections that might not be apparent at first glance. By comparing and contrasting different subjects, we can gain a more comprehensive understanding of the world and make more informed decisions. Whether in literature, science, or daily life, comparative analysis is a critical skill that can enhance our understanding and appreciation of the world around us.对比法是一种有价值的工具,它使我们能够通过比较和对比不同的事物来更深入地理解它们。
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第一部分阅读(共两节,满分50分)第一节(共15小题;每小题2.5分,满分37.5分)阅读下列短文,从每题所给的A、B、C、D四个选项中,选出最佳选项。
AEYLEAConsumer Brief SummaryThis summary contains risk and safety information for patients about EYLEA. It does not include all the information and does not take the place of talking to your eye doctor.What is EYLEA?EYLEA is a medicine that works by blocking vascular endothelial growth factor(VEGF), which can cause fluid to leak into the macula(视网膜黄斑).What is EYLEA used for?EYLEA is indicated for the treatment of patients with:·Macular Edema Following Retinal Vein Occlusion(RVO)·Diabetic Macular Edema(DME)·Diabetic Retinopathy(DR)How is EYLEA given?EYLEA is an injection(注射)administered by eye doctor and the injections are given on different schedules. Confirm with your doctor which schedule is appropriate.What are the most common side effects of EYLEA?·Eye pain·Light sensitivity·Increased eye rednessFor more possible side effects, ask your eye doctor. You are encouraged to report negative side effects of prescription drugs to the FDA. Visit /medwatch, or call1-800-FDA-1088.What should I tell my eye doctor before receiving EYLEA?·Infections in or around the eye·Eye pain or redness·Being allergic to any ingredients in EYLEA·Being or planning to be pregnantWhere can I learn more about EYLEA?For a more comprehensive review of EYLEA safety and risk information, talk to your health care provider and see the full information at EYLEA. com.1. Who is the passage intended for?A. Eye doctors.B. Medicine students.C. Drug researchers.D. Patients with eye conditions.2. How can you learn more about EYLEA?A. Visit .B.Call1-800-FDA-1088.C. Visit /medwatch.D. Talk to a medical professor.3. What is this text?A. A medical report.B. An introduction to a book.C. A healthcare contract.D. A piece of medical instructions.BWatford and her family have lived in Curtis Bay, Baltimore for generations. Her community has faced environmental injustice. Heavy industries continued to move in her community. As a result, her neighbors have had to live with serious respiratory(呼吸的)problems.When she knew a plan to build the nation’s largest trash-burning incinerator(焚化炉)less than a mile away from her high school, she realized she had to take action. The incinerator was being sold wrongly as clean, renewable energy equipment but actually it would be a source of brain-damaging chemicals and would release 200 million tons of greenhouse gases per year, both worse than coal burning. Watford felt she had a responsibility to warn her community to work together to shut this plant down.She co-founded Free Your V oice(FYV), a 10-person student organization devoted to community rights and social justice. Together, they decided to start a campaign to take down Energy Answers, the incinerator’s developer. They went door-to-door talking to neighbors and organizing protests.When it was discovered that Baltimore City Public Schools(BCPS)was going to be a customer of Energy Answers, the organization fought with the board and presented their case, urging BCPS to withdraw from the project. BCPS was convinced to cancel their contract, which in turn inspired 22 other customers to do the same. Without any financial gain, Energy Answers had no market to move forward with its plan.Watford continues to work with Curtis Bay residents toward fair development. They have a vision for the future which includes building a zero-waste movement, a solar farm, and green jobs. She wants the entire human family to join the fight for environmental justice because survival as a species depends on our ability to take action.4. What caused respiratory problems in Watford’s community?A. Poor medical care.B. Terrible environmental conditions.C. Constant bacterial infection.D. Unbalanced distribution of resources.5. What is Watford’s attitude to building the incinerator?A. Unfavourable.B. Doubtful.C. Unclear.D. Indifferent.6. What was the result of their campaign?A. BCPS lost financial support.B. Energy Answers stopped its plan.C. The investors found new market.D. Many customers revised their contracts.7. What would be the best title for the text?A. A teenage hero against urban pollutionB. A teenage hero fighting for an advanced cityC. A battle for Baltimore’s sky by a teenage heroD. The social justice challenge for a teenage heroCHumans work hard to avoid viruses. Sick people are isolated, diseased animals are killed and fields of infected crops are fired up. Reviving(复活)an ancient virus would surely be a disaster.But a new study led by Fiddamanfrom Oxford, challenges this conventional wisdom. It shows how the revival of an ancient virus can unlock the secrets of its evolution.The virus in the study is Marek’s disease virus(MDV), killing more than 90% of chickens. Yet when it was discovered in 1907, MDV rarely caused death.Dr Fiddaman wondered whether its new-found virulence(毒性)was a result of large structural changes. To find out, he and his colleagues got their hands on nearly 1,000 chicken bones from ancient times across Europe and Asia, some of them up to 2000 years old. Sections of DNA from these remains were mapped on to the ones of today’s virus.As the authors pieced together the sets of genes of ancient MDV, however, they noticed that the genes were arranged identically to those in modern species. It suggests that the increased virulence resulted not from large structural changes, but from point mutations(突变). In particular, changes had occurred in the arrangement of a gene called MEQ, which has an essential role in tumour(肿瘤)formation.This discovery suggests that the ancient MDV may not have been able to cause tumours. To test this assumption, Dr Fiddaman followed up with a daring experiment. He made the ancient form of the MEQ gene and shoot it into living chicken cells. It did not turn on any of the genes associated with tumour formation. In comparison, a modern MEQ gene quickly showed its tendency to cause tumours.By combining ancient and modern genetic biology, the methods pioneered in the paper reveal how, and more importantly why, any virus mutates. That could help scientists tackle other viruses that pull on the purse-strings of farmers —by designing new vaccines(疫苗), for instance— or even to work out how to prevent another global pandemic.8. What is widely acknowledged about the revival of an ancient virus?A. It is a challenging task.B. It reveals the virus evolution.C. It means a disaster for humans.D. It helps people fight diseases.9. What caused the virulence change of MDV?A. Point mutations in MEQ.B. The occurrance of a new gene.C. The reproduction of the ancient MDV.D. Large structural changes in modern species.10. How did Dr Fiddaman test the assumption?A. By investigating a typical case.B. By conducting a field survey.C. By studying the related theories.D. By doing a comparative experiment.11. What can we infer from the last paragraph?A. Viruses weaken gradually when they mutate.B. The finding throws light on handling other viruses.C. A global pandemic requires a world effort to end it.D. Farmers will face more complex challenges than before.DWhen American anthropologist Colin Turnbull published The Mountain People in 1972, he referred to his subjects —a Ugandan group called the Ik — as “the loveless people.” After two years of observations, he decided that they reflected humanity’s basic instincts(本能): cheat, thievery, and pitilessness. But when Athena Aktipis and her colleagues from the Human Generosity Project took a deeper look, they identified a community that shared everything. “Turnbull had visited Uganda during a disastrous famine(饥荒). All he saw is what happens when people are starving.” says Aktipis. But her team revealed that despite living under pressure, the Ik placed a high value on helping one another when they could.Aktipis believes that altruism is more common and beneficial than evolutionary social science has long thought. “It was assumed that people are designed to only do things to help themselves or their relatives.” she says. By studying the unique, selfless practices that helped nine communities across the world to continue to exist, the experts from the Project are looking to show that we are indeed capable of widespread cooperation.The Maasai people in Kenya provide one of the project’s main points. They rely on two-way friendships for resources like food or water when they’re in need, without expecting any repayment. Also, a world away, in New Mexico, while folks often help transport cattle and receive support in return, they will assist without repayment if someone faces difficulties, such as an injury or the death of a loved one.Aktipis believes theoretical frameworks she’s perfected through studying these groups can apply broadly to any interdependent systems. Her big goal is to design social-service systems that support everyone. Take market -based insurance in the United States as an example: It’s priced based on individual risk factors such as health histories and where people live, which means millions of Americans can’t afford it. But in a system built on neighboring, pooled costs(合并成本)would level the burden during collective hardship like natural disasters and pandemics.12. What did Turnbull think of the Ik people?A. Heartless.B. Helpful.C. Restless.D. Generous.13. What does the underlined word “altruism” in paragraph 2 probably mean?A. Trying to be strong and tough to survive.B. Making full use of the surrounding resources.C. Being devoted to themselves or their relatives.D. Caring about the needs and happiness of others.14. What does paragraph 3 intend to convey?A. Friendships guarantee a well-being life.B. Folks assist each other to get support.C. Cooperation is a good and natural instinct.D. People tend to provide resources for free.15. How does Aktipis intend to apply her findings?A. By designing a policy for public health.B. By monitoring individual health histories.C. By creating a system against collective hardship.D. By lowering insurance prices for individual victims.第二节(共5小题;每小题2.5分,满分12.5分)根据短文内容,从短文后的选项中选出能填入空白处的最佳选项。
DOI:10.1002/anie.201210238Comparison of Oxidative Aromatic Coupling and the Scholl ReactionMarek Grzybowski,Kamil Skonieczny,Holger Butenschçn,*and Daniel T.Gryko*AngewandteChemieKeywords:arene coupling ·biaryls ·Lewis acids ·oxidative coupling ·Scholl reactionDedicated to Prof.Alexandru Balaban on theoccasion of his 80th birthday.Angewandte ReviewsH.Butenschçn,D.T.Gryko et al.99002013Wiley-VCH Verlag GmbH &Co.KGaA,WeinheimAngew.Chem.Int.Ed.2013,52,9900–99301.IntroductionThe first example of an oxidative dimerization of aromatic compounds was published in 1871,[1]and 39years later Roland Scholl reported that a similar effect can be achieved by heating certain aromatic compounds with AlCl 3.[2]For many years,these two reactions were distinguishable,and when Balaban and Nenitzescu published their fundamental review on the Scholl reaction,there was still a clear demar-cation between them.[3]Nowadays,however,there is a mix-up in the literature,and the oxidative coupling of electron-rich aromatic substances is often called the Scholl reaction.The aim of this Review is to summarize the development of both reactions,to discuss their mechanisms,and to show their current scope.We will present the historical origin of both of these processes in Section 2,followed by a discussion of their mechanisms in Section 3.In that section we will discuss the similarities and differences between reactions mediated by AlCl 3and reactions mediated by typical oxidants in terms of scope and electronic requirements.[4]In the following two sections we will present representative examples of the Scholl reaction (Section 4),intramolecular oxidative coupling,and intermolecular oxidative coupling reactions (Section 5).We will focus on the most important examples,with special emphasis given to the recent literature.Palladium-catalyzed oxidative aromatic cross-coupling and dehydrogenative cou-pling by C ÀH activation by organometallic catalysts are not included in this Review.[5]2.Historical Development2.1.Oxidative Aromatic CouplingThe first known example of the oxidative coupling of aromatic compounds,the formation of ellagic acid (2)from gallic acid (1),was published in 1868(Scheme 1).[1]The reaction was mediated by H 3AsO 4or Ag 2O;however,the yield was not reported.Other examples quickly followed,and in the 1870s it was shown that a variety of phenols and phenyl ethers can be coupled oxidatively using one-electron oxidants such as FeCl 3or K 3[Fe(CN)6].Seminal examples include the synthesis of 1,1’-bi-2-naphthol (binol,4)by the oxidation of 2-naphthol (3)with FeCl 3reported in 1873by Dianin (Scheme 2).[6b]Progress continued into the 20th century and accelerated after the discovery of the role of oxidative aromatic coupling in biogenesis.[7]The early literature has been summarized by[*]M.Grzybowski,K.Skonieczny,Prof.Dr.D.T.GrykoInstitute of Organic Chemistry,Polish Academy of Sciences Kasprzaka 44/52,Warsaw (Poland)E-mail:dtgryko@.pl Prof.Dr.H.ButenschçnInstitut für Organische Chemie Leibniz Universität,HannoverSchneiderberg 1B,30167Hannover (Germany)Prof.Dr.D.T.GrykoFaculty of Chemistry,Warsaw University of Technology 00-664Warsaw (Poland)D oes the dehydrogenative coupling of aromatic compounds mediatedby AlCl 3at high temperatures and also by FeCl 3,MoCl 5,PIFA,or K 3[Fe(CN)6]at room temperature proceed by the same mechanism in all cases?With the growing importance of the synthesis of aromatic compounds by double C ÀH activation to give various biaryl structures,this question becomes pressing.Since some of these reactions proceed only in the presence of non-oxidizing Lewis acids and some only in the presence of certain oxidants,the authors venture the hypothesis that,depending on the electronic structure of the substrates and the nature of the “catalyst”,two different mechanisms can operate.One involves the intermediacy of a radical cation and the other the formation of a sigma complex between the acid and the substrate.The goal of this Review is to encourage further mechanistic studies hopefully leading to an in-depth understanding of this phenomenon.From the Contents1.Introduction99012.Historical Development 99013.Mechanistic Considerations 99034.Scholl Reaction—Scope,Limitations,and Utilization 99065.Oxidative Aromatic Coupling 99076.Summary and Outlook9926Scheme 2.Scheme 1.Biaryl Synthesis9901Angew.Chem.Int.Ed.2013,52,9900–9930 2013Wiley-VCH Verlag GmbH &Co.KGaA,WeinheimHeuben,[8]and later examples have also been extensively reviewed.[9,10]2.2.Scholl ReactionThe Scholl reaction was first mentioned as early as 1910,when Scholl and Mansfeld reported the transformation of quinone 5to the p -extended quinone 6by treatment with an excess of neat anhydrous aluminum chloride for 45min at 140–1458C as a clean reaction,although no yield was given (Scheme 3).The authors mentioned that such a reaction had been observed earlier,for example in the formation of 1,1’-binaphthalene by heating naphthalene with aluminum chlo-ride,but they emphasized that the observation of the formation of quinone 6under comparatively mild reaction conditions was new.[2]In a subsequent publication,this reaction was applied to the synthesis of perylene (8)from 1,1’-binaphthalene (7;Scheme 4).Interestingly,Homer de-scribed the same reaction at the same time,but without the true formula of the product 8.[11]Perylene (8)was also obtained from naphthalene (9)without isolation of the intermediate 7;however,because of some decomposition,the yield of 8was poor.[12]Later,the reaction of 4,4’-dicyano-1,1’-binaphthalene was reported to give the corresponding coupling product in 72%yield.[13]The method was further elaborated and led to the synthesis of benzanthrone (11)from ketone 10and of compound 13from 12(no yield was given in the last case,Scheme 5).[14,15]Numerous other examples were published by Scholl and co-workers in the following years.[16,17]Possible mechanisms were discussed in some of the early reports on the dehydrogenative coupling of aromatic com-pounds by treatment with anhydrous aluminum chloride;these mechanisms were mainly based on similarities to Friedel Crafts reactions.[15]The original procedure by Scholl required baking the organic substrate with AlCl 3.This procedure was soon replaced by Kränzlein and Vollmann,who used an equimolar mixture of AlCl 3and NaCl,which is liquid above 1008C at a low vapor pressure,[18]and this procedure predominates in the later literature.Since the early 1920s,this reaction has been utilized in the industrial synthesis of many antraqui-none-derived dyes.It is difficult to overestimate the technical importance of the Scholl reaction.Indanthrene khaki 2G (15)Scheme 3.Scheme 4..Angewandte ReviewsH.Butenschçn,D.T.Gryko et al.2013Wiley-VCH Verlag GmbH &Co.KGaA,Weinheim Angew.Chem.Int.Ed.2013,52,9900–9930has been produced in millions of kilograms from 14(Scheme 6).[3,19]After World War II,the focus shifted and the Scholl reaction started to be used in the synthesis of extended aromatic hydrocarbons.This new direction sparked methodo-logical developments.In 1971,Wick revealed that the cyclization of di-(1-anthraquinonyl)amine into 1,2;7,8-di-phthaloylcarbazole (C.I.Vat Yellow 28)proceeds more efficiently in the presence of an AlCl 3/pyridine complex than in an AlCl 3/NaCl melt.[20]Other variants include the use of AlCl 3in high-boiling solvents such as dichlorobenzene and trichlorobenzene,[21]low-melting complex AlCl 3/SO 2,[22]or of ZrCl 4.[23]Needless to say,many protocols involve the addition of a certain amount of oxidant such as air,oxygen,nitro-benzene,or potassium m -nitrobenzene sulfonate.[24]In 1961,Kovacic and Kyriakis introduced new conditions for the oxidative polymerization of benzene (AlCl 3/CuCl 2/neat),[25a]which were later modified by Müllen and co-workers (AlCl 3/CuCl 2/CS 2[25b]and AlCl 3/Cu(OTf)2/CS 2),[25c]thus allowing the reaction temperature to be lowered to 258C.3.Mechanistic ConsiderationsNumerous examples of dehydrogenative coupling reac-tions of aromatic compounds in the presence of various Lewis acids have recently been published.[26]In most cases,they are assigned as Scholl reactions.[27]Here,we come to the critical question of whether there is a difference between oxidative aromatic coupling and the Scholl reaction.The typical oxidative aromatic coupling relates to the reaction of electron-rich aromatic compounds such as phe-nols,alkyl aryl ethers and the like.The broadly accepted mechanism is shown in Scheme 7.It involves the formation ofa radical cation from one molecule of the substrate followed by substitution at the neutral second molecule and finally convergence to the biaryl product.This mechanism implies that:1)the substrate is reasonably electron rich and 2)the attack of the electrophilic radical cation occurs at the most electron-rich position of the second substrate molecule.Other mechanistic pathways have also been discussed for the coupling of phenols,such as oxidation to the radical followed by dimerization and radical substitution.[10]According to the definition proposed in very early reviews,the Scholl reaction is a dehydrogenation of aromatic nuclei under the influence of aluminum chloride that results in the formation of a condensed ring system.[28]Balaban and Nenitzescu reformulated it as “the elimination of two aryl-bound hydrogens accompanied by the formation of an aryl–aryl bond under the influence of Friedel–Crafts catalysts”.[3]Baddeley was the first to propose that the mechanism of the Scholl reaction involves the formation of a s complex between the Lewis acid with the aromatic compound followed by the formation of an arenium cation,an electrophilic attack,and finally a dehydrogenation.[29]This hypothesis was further reformulated by Nenitzescu and Balaban.[30]Kenner,on the other hand was the first to propose a radical cation mechanism for the Scholl reaction.[31]This concept was soon supported by Rooney and Pink [32]and later by Clover.[33]The arenium cation mechanism implies the protonation of the aryl species,for example,7,to form an electrophilic s complex 7’(shown with H +for simplicity,but this couldalsoScheme5.Scheme6.Scheme 7.Biaryl Synthesis9903Angew.Chem.Int.Ed.2013,52,9900–9930 2013Wiley-VCH Verlag GmbH &Co.KGaA,Weinheimbe a s complex with a Lewis acid;Scheme 8).The attack of the latter species at the other aromatic ring to form a new carbon–carbon bond (7’’)followed by hydrogen elimination regenerates the aromatic system,finally giving 8.Numerous experimental results supported this mecha-nism.Several research groups observed that dehydrogenation of certain aromatic compounds can occur not only in the presence of AlCl 3and similar Lewis acids,but also in media such as anhydrous HF [34,35]or PhSO 3H,[30]while radical cations cannot be formed under such conditions.Baddeley and Kenner observed that the presence of hydrogen chloride is essential for the synthesis of benzanthrone (11)to occur.[29]Electronic and steric effects in various positions play a con-siderable role in intramolecular cases.Remarkably,benzo-phenone does not yield fluorenone upon heating with AlCl 3at 180–2208C,[15]most likely because this would involve an electrophilic aromatic substitution at the ortho position relative to the carbonyl group.On the other hand,milder reaction conditions (1008C)allowed the synthesis of phenan-threnequinone from benzil.[14]The third step,that is,dehy-drogenation/aromatization,is the most controversial one,since studies have shown that only a substoichiometric amount of H 2was evolved when ketones were subjected to Scholl reaction conditions.To the best of our knowledge,no such study has so far been performed on hydrocarbons.There is an unquestionable positive influence on the yield of products from the Scholl reaction when hydrogen acceptors are added to AlCl 3.Various examples include O 2(conversion of 3,8-dibenzoylpyrene into pyranthrone,25%versus 80%;[36]conversion of 1,5-dibenzoylnaphthalene into 2,3;7,8-dibenzo-pyrene-1,6-quinone),[10]and nitrobenzene (intermolecular reaction of ethyl 1-naphthyl ether,0%versus 70%).[37]Importantly,the carbonyl group present in many Scholl reaction precursors can serve as a temporary oxidizing agent.In such cases,the corresponding secondary alcohol can be an intermediate,which is then reoxidized by O 2to a ketone.Balaban and Nenitzescu argue that this may be the reason for the high yields of the intramolecular Scholl reactions with these ketones,despite the electron-withdrawing (hence deactivating)character of the carbonyl group.[3]While discussing possible pathways of rearomatization,one has to remember that AlCl 3itself can catalyze the dehydrogenation of compounds such as 9,10-dihydroanthracene.[37]The second mechanism advocated by Kenner,Rooney,and Clover implies the formation of radical cations (Scheme 9).Although the mechanism has been studied only occasionally,the schism continued,and in recent years an intense discussion has evolved,prominently between the research groups of King and Rathore.The differentiationbetween the two mechanisms is clearly not a trivial issue.One of the key difficulties lies in the fact that most of the Lewis acids used in the Scholl reaction are also milder or stronger oxidants.Moreover,aromatic hydrocarbons can also form paramagnetic species in the presence of non-oxidizing AlCl 3.[32]The problem with the most commonly used oxidant,namely FeCl 3,is that this compound is both a Lewis acid and an oxidant capable of catalyzing or mediating a variety of reactions.For this reason,experiments with FeCl 3or MoCl 5cannot give the definitive answer to the key mechanistic question.One of the iron complexes broadly used in oxidative aromatic coupling,[9]which cannot be considered a Lewis acid,is K 3[Fe(CN)6],but its relatively low oxidation potential does not allow for direct comparative studies in many cases.King and co-workers published a series of reports that presented both computational and experimental evidence supporting the arenium ion mechanism.[38]Computational studies led to the conclusion that the mechanistic pathway involving the arenium cation is thermodynamically favored under both vacuum and solvated conditions,because of the transition states have lower energy than those found in the radical cation pathway.Additionally,the authors presented computational evidence showing that in the case of the oxidation of hexaphenylbenzene to hexa-peri -hexabenzocor-onene,the formation of the first C ÀC bond is the slowest.This explains the lack of observed intermediates in this process.One has to emphasize,however,that the interaction of the reagents with the organic substrate was not taken into account in these calculations.Given that this would probably bring about considerable energy differences,more advanced com-putational methods have to be applied to gain a more in-depth understanding of this process.Rathore and co-workers studied the reaction of electron-rich aromatic compounds in the presence of various oxidants in detail,focusing on DDQ-MeSO 3H.[39]The same system had been used previously by these authors to efficiently synthesize a number of triphenylenes and hexa-peri -hexabenzocoro-nenes under mild conditions.[40]They presented some impor-tant evidence suggesting that,for many o -terphenyls such as 19,the reaction indeed proceeds via radical cation inter-mediates such as 19 and 19 (Scheme 9).First theyshowedScheme8.Scheme 9..Angewandte ReviewsH.Butenschçn,D.T.Gryko et al.2013Wiley-VCH Verlag GmbH &Co.KGaA,WeinheimAngew.Chem.Int.Ed.2013,52,9900–9930that various Scholl precursors with oxidation potentials <1.7V versus the SCE readily undergo oxidative C ÀC bond formation with DDQ/H +as the oxidant,whereas those with oxidation potentials >1.7V versus the SCE do not react.Additionally,they noted that the reaction does not occur in mixtures of CH 2Cl 2and various acids.These authors also claimed that the necessity of using strong oxidants for this reaction to occur is inconsistent with the arenium ion mechanism,since oxidation of dihydro intermediates such as 19a (formed through the arenium ion mechanism,Scheme 9)can easily be accomplished even with molecular oxygen.They did not,however,extend their study further to include compounds with lower oxidation potentials and/or larger aromatic systems.In our opinion,one of the most important compounds with a behavior that may help to understand the difference between typical oxidative aromatic coupling and the Scholl reaction is 2,2’-dihydroxy-1,1’-binaphthyl (4).This compound is formed by the oxidative aromatic coupling of 2-naphthol (3,Scheme 2).Subjecting 4to further portions of FeCl 3is ineffective,regardless of the conditions.In contrast,as early as in 1922,Zinke and Dengg performed the reaction of both 2,2’-dihydroxy-1,1’-binaphthyl (4)and 2,2’-dimethoxy-1,1’-binaphthyl (21)with AlCl 3,which resulted in the formation of perylene-1,12-diol (22),thus involving a cleavage of the ether functions in the case of 21(Scheme 10).[41]The authors preferred to start from the dimethoxy derivative 21as thereaction was initially much more sluggish when starting from the respective diol 4,presumably because of side reactions of the hydroxy functions with AlCl 3.The reaction conditions are remarkable,because neat 4/21and a fourfold excess of AlCl 3are mixed and melted at 140–1508C for 1h,with no solvent being used.Phenol 22undergoes oxidation by basic solutions in air with the formation of the respective quinone 23.[42]Later,the authors reported the synthesis of crystalline 23by oxidation of the crude product of quinone 22with lead(IV)oxide,which was purified by crystallization.Subsequent reduction of 23with zinc dust or sodium dithionite affords 22in pure form as bright yellow leaves,which become green on standing in air over longer periods of time.[43]It is clear that the highest electron density in compound 4is present at positions 3and 3’,and indeed electrophilic aromatic substi-tutions were performed at these positions.Oxidative aromatic coupling proceeding through the radical cation mechanism is very sensitive to the distribution of the electron density within the molecule.Numerous examples show that it proceeds:1)only if the overall electron density of the aromatic molecule is relatively high and 2)only at the position wherethe electron density is the highest.Consequently,the reaction of diol 4with FeCl 3,which tends to form radical cations,cannot proceed with carbon–carbon bond formation at positions 8and 8’(which possess rather moderate electron density).On the other hand,the reaction in the presence of AlCl 3is apparently less sensitive.It can proceed even when the overall electron density is significantly lower (the trans-formation of ketone 10into benzanthrone 11is a good example),and it can also proceed at positions which are not the most electron rich ones in the molecule (especially in an intramolecular fashion).The preparation of 1,12-dihydroxy-perylene (22)from (1,1’-binaphthalene)-2,2’-diol (4)through the action of AlCl 3was later patented by various authors.[44,45]The reactivity of naphthylisoquinolines is another exam-ple that emphasises this fundamental mechanistic difference stated above.We recently discovered the synthesis of 1-azaperylene (25)by anion radical coupling of two regioiso-meric naphthylisoquinolines,24and 26.[46]These substrates seemed to us to be perfect models to study the interrelation between AlCl 3-mediated reactions and FeCl 3-mediated reac-tions,since the oxidation potentials of naphthalene and isoquinoline are rather high.Indeed,both substrates are inert in the presence of stoichiometric or excess amounts of FeCl 3at 258C and 808C.[47]On the other hand,compound 24reacts in a AlCl 3/NaCl (5:1)melt at 1608C to afford 1-azaperylene (25)in 68%yield (Scheme 11).[47]In the case of 8-(naph-thalen-1-yl)isoquinoline (26),such a reaction would require an electrophilic attack at position 1of the isoquinoline moiety,which is very electron poor.Hence,submitting compound 26to Scholl reaction conditions does not result in the formation of 1-azaperylene (25).[47]An analogous example from our research group is the reaction of compound 27in the presence of AlCl 3/NaCl to afford p -extended coumarin 28in 30%yield (Scheme 12).[48]Again,the reaction of coumarin 27with FeCl 3does not proceeded,most likely because of the electronic effectsScheme 11.Scheme 12.Scheme 10.Biaryl Synthesis9905Angew.Chem.Int.Ed.2013,52,9900–99302013Wiley-VCH Verlag GmbH &Co.KGaA,Weinheimimparted by the OH group,which does not activate a suitable position for reaction to occur.In the context of the recent discussion concerning the mechanism of the dehydrogenation of aromatic compounds under various conditions,it seems that processes that occur at room temperature with a well-known one-electron oxidant (sometimes mild Lewis acids such as FeCl 3or MoCl 5)and processes which proceed at 120–1608C in the presence of AlCl 3(a strong Lewis acid)most probably undergo a different mechanism.We venture to say that the radical cation mechanism is operating in the first case and the arenium cation mechanism in the second case.The experiments by Nenitzescu and Balaban that show,in some cases,that dehydrogenation proceeds in the presence of a Brønsted acid (and nitrobenzene as the co-oxidant)supports this line of thought.[30]The reaction mediated by AlCl 3can generally proceed with substrates less electron rich than those for oxidative aromatic coupling.4.Scholl Reaction—Scope,Limitations,and UtilizationThe earliest examples of the Scholl reaction focused on the synthesis of large polyaromatic ketones and quinones.1-Benzoylpyrene is cyclized in an AlCl 3/NaCl melt to furnish dibenzo[def ,qr ]chrysene-8-one in approximately 40%yield.[36]The first example of multiple dehydrogenative coupling was reported by Scholl and Seer in 1913.The authors treated 4,4’-dibenzoyl-1,1’-binaphthyl (29)with AlCl 3for 8.5h at 95-1008C and obtained the nonacyclic dione “violanthrone”(30);however,again no yield was reported (Scheme 13).Oneof the largest systems ever synthesized by the Scholl reaction is quinone 32prepared from ketone 31(no yield given,Scheme 14).[49]The dehydrogenation of aromatic hydrocarbons can also take place upon melting in a vacuum (no yield given,Scheme 15).[50]Müllen and co-workers published a very interesting study showing that 3-(1-naphthyl)perylene (36)undergoes oxida-tive coupling to either 35or 37depending on the reaction conditions (Scheme 16).[51]Compound 36in the presence ofFeCl 3in dichloromethane forms 37in 46%yield,while an analogous reaction with AlCl 3in chlorobenzene gives rise to terrylene (35)in 43%yield.This result further emphasizes that the cyclization of aromatic hydrocarbons in the presence of oxidizing and non-oxidizing Lewis acids usually proceeds by different mechanisms.Cyclization of 12-(1-naphthyl)benz[a ]anthracene (39)in an AlCl 3/NaCl melt furnishes benzo[def ]naphtha[1,2-p ]chrys-ene (38;10%).However,if AlCl 3/SnCl 4is used,the main product is naphtho[1,2-a ]perylene (40;60%,Scheme 17).[52]These results further indicate that the nature of the reactive intermediates can vary quite significantly on changing the reaction conditions slightly.Scheme 13.Scheme 14.Scheme 15.Scheme 16.Scheme 17..Angewandte ReviewsH.Butenschçn,D.T.Gryko et al.2013Wiley-VCH Verlag GmbH &Co.KGaA,WeinheimAngew.Chem.Int.Ed.2013,52,9900–99302,3,4,5-Tetraphenylthiophene (41),when subjected to classical Scholl conditions (AlCl 3/NaCl,4:1),gives flavophen (42)in 26%yield (Scheme 18).[53]The reaction can be applied to heterocyclic systems,as has impressively been shown in an American patent disclosing the reaction of N -acylurea 43to afford pentacycle 44(no yield given,Scheme 19).[54]Weitzenbçck and Seer reported that dinaphtho[2,1-b :1’,2’-d ]furan undergoes cyclization to peryleno[1,12-bcd ]furan in the presence of AlCl 3,with the concomittent formation of perylen-1-ol.[13]Polyphosphoric acid has been used to induce the cyclization of precursor 45(Scheme 20).[55]Amino-substituted benzo[g ,h ,i ]perylene 46forms in excellent yield in a domino reaction involving an electrophilic sub-stitution followed by a Scholl reaction.5.Oxidative Aromatic Coupling5.1.Intermolecular Oxidative Aromatic CouplingAs stated above (see Section 3and Scheme 7),the reactions of reasonably electron-rich arenes with oxidants that lead to the formation of biaryls usually proceed through the radical cation mechanism.The term “oxidative coupling”will be used in this and the following sections for such reactions.The simplest variant of the oxidative coupling reaction is intermolecular oxidative homocoupling,in whichtwo molecules of one aromatic compound react to form a biaryl.The oxidative cross-coupling of aromatic compounds (the reaction between two different arenes)is much more difficult to achieve.This is due to the poor selectivity of the reaction,which strongly depends on steric factors as well as on the electron density of both aromatic molecules.The con-ditions must carefully be selected to avoid homocoupling.[56]Nonetheless,significant progress has been made in the field of intermolecular oxidative cross-coupling over recent years,and many interesting examples have been published.Some representative examples of intermolecular oxidative homo-and cross-coupling reactions of arenes from the recent literature are presented in the following sections.5.1.1.Homocoupling of Naphthalene DerivativesThe oxidative coupling of aromatic compounds often leads to the formation of axially chiral products.Structures of many widely used optically active catalysts are based on biaryl units.[57]Among them,binaphthyl and its derivatives are particularly important.1,1’-Bi-2-naphthol (4),whose first synthesis was described in Section 2.1,is a precursor of many important ligands used in asymmetric catalysis,with binap being the most prominent example.[58]The syntheses of binol (4)and other binaphthyls by the oxidative coupling of the corresponding naphthalenes were achieved under various conditions,and racemic products as well as pure enantiomers could be obtained.Many different catalytic systems,oxidants,and metal complexes were examined for this purpose.Besides the classical systems with FeCl 3,reasonable yields of binaphthyls were also achieved using reactants such as thallium(III)and mercury(II)trifluoroacetates,Pb(OAc)2,and CoF 3,[59]titanium(IV)chloride,[60]or CuCl 2in the presence of amines.[61]Particularly interesting are the cata-lyzed homocoupling reactions of naphthalenes to binaphthyls,for example,peroxidase-catalyzed oxidation with H 2O 2,[62]copper(I)-or copper(II)-catalyzed oxidation under oxygen or air,[63]as well as the oxidation catalyzed by methyltrioxo-rhenium.[64]The syntheses of various binaphthyls have been summarized in recent reviews.[65]Only a few recent examples are presented below.Shaw and co-workers employed a vanadium catalyst in the air oxidation of the chiral naphthol 47to binaphthol 48,a key intermediate in the synthesis of (À)-viriditoxin,which is a promising inhibitor of bacterial cell division.[66]The reaction in the presence of [VO(acac)2]as the catalyst gave the product 48in 67%yield with rather low diastereoselectivity (76:24).When [VO(acac)2]was replaced by the enantiopure chiral catalysts 49,which is a binol derivative,both the reaction yield and the diastereoselectivity substantially increased (Scheme 21).Many interesting copper complexes for the oxidative coupling of naphthols were developed by Kozlowski and co-workers,and and have successfully been applied in the total syntheses of numerous chiral,natural binaphthyl derivatives with high enantioselectivity.[65e,67]Wang and co-workers recently reported two new systems which are efficient in the oxidation of various 2-naphthols into the corresponding racemic binaphthols (Table 1).In thefirstScheme18.Scheme19.Scheme 20.Biaryl Synthesis9907Angew.Chem.Int.Ed.2013,52,9900–99302013Wiley-VCH Verlag GmbH &Co.KGaA,Weinheim。
两个学科比较英语作文范文Introduction:The academic world is a vast expanse of disciplines, eachwith its own unique characteristics and methods of inquiry. Among the myriad subjects, English and Mathematics stand outas two distinct fields that not only shape our understandingof the world but also influence our daily lives in profound ways. This essay aims to compare and contrast the fundamental aspects of these two subjects, highlighting their differences and the unique perspectives they offer.Body Paragraph 1 - Nature of the Subjects:English, as a language-based discipline, focuses on the study of language, literature, and communication. It is inherently qualitative, delving into the nuances of human expression, cultural context, and the aesthetic value of written and spoken words. On the other hand, Mathematics is aquantitative field that deals with numbers, data, and logical reasoning. It is characterized by its precision, universality, and the use of abstract concepts to solve problems.Body Paragraph 2 - Learning Approaches:The approach to learning in English often involves reading, writing, and critical analysis. Students are encouraged to explore various genres of literature, understand theunderlying themes, and develop their own interpretations. Creativity and personal expression are highly valued inEnglish studies. Conversely, learning Mathematics requires asystematic and structured approach. It involves learning algorithms, solving equations, and proving theorems. The emphasis is on accuracy, logical consistency, and the ability to apply mathematical principles to real-world scenarios.Body Paragraph 3 - Practical Applications:English has a wide range of practical applications thatextend beyond the classroom. It is the cornerstone of communication in various professional fields, from businessto law, and is essential for effective writing, public speaking, and critical thinking. Mathematics, too, has numerous practical applications, from calculating financial models in economics to analyzing data in the sciences. Its principles underpin many technological advancements and are crucial for problem-solving and decision-making processes.Body Paragraph 4 - Skills Developed:Studying English develops skills such as empathy, as students engage with different characters and perspectives in literature. It also enhances analytical thinking, as students must dissect texts to understand the deeper meanings. Mathematics, however, cultivates a different set of skills, including logical reasoning, abstract thinking, and precision. It trains students to approach problems methodically and to appreciate the beauty of structured solutions.Conclusion:In conclusion, English and Mathematics are two subjects that, while seemingly disparate, both play integral roles inshaping our intellectual capabilities and worldviews. English enriches our understanding of human expression and culture,fostering creativity and communication skills. Mathematics, with its emphasis on logic and precision, equips us with the tools to make sense of the quantitative aspects of the universe. Both subjects are indispensable, each contributing uniquely to the tapestry of human knowledge and experience.。
基因差异表达与杂种优势形成机制探讨HEREDITAS (Beijing) 2013年6月, 35(6): 714―726 ISSN 0253-9772/doc/b65ca70d76eeaeaad0f3307a.html 综述收稿日期: 2012?10?23; 修回日期: 2012?12?03基金项目:“十二五”国家科技支撑计划课题(编号:2012BAD01B01)和国家自然科学基金项目(编号:30972393)资助作者简介:许晨璐, 在读博士研究生, 研究方向:落叶松杂种优势。
E-mail:gengniure@/doc/b65ca70d76eeaeaad0f3 307a.html通讯作者:孙晓梅, 研究员, 博士生导师, 研究方向:落叶松良种选育及培育技术。
E-mail: xmsun@/doc/b65ca70d76eeaeaad0f3307 a.html网络出版时间: 2013-4-10 17:12:18URL:/doc/b65ca70d76eeaeaad0f3307a.html/kcms/detail/11.1913.R.20130410.1712.001.htmlDOI: 10.3724/SP.J.1005.2013.00714基因差异表达与杂种优势形成机制探讨许晨璐, 孙晓梅, 张守攻中国林业科学研究院林业研究所, 国家林业局林木培育重点实验室, 北京 100091摘要: 对杂种优势这一普遍而重要的生物学现象研究虽有百余年的历史, 但其根本机理尚未阐述清楚。
继基因组组成差异及基因效应研究之后, 基因表达差异成为探寻杂种优势分子机理新的切入点。
旨在通过揭示杂种中等位基因差异表达、杂种与亲本间基因差异表达的调控机制, 来认识杂种优势形成的分子机理, 从而达到指导育种实践的目的。
文章概述了杂种等位基因差异表达现象及其产生机理, 总结了杂种与亲本相比所呈现出的加性、显性和超显性等多种差异基因表达模式, 归纳了表达谱研究筛选出的与杂种优势形成有关的基因, 以及某些关键生化代谢途径对杂种优势形成的贡献。
经验交流中国酿造2019年第38卷第1期总第323期勺斗令核桃青皮不同溶剂提取物抗氧化及抑菌活性比较曹文利S薛雨菲S杨永兴S杨茜1,李芳2,孔令明(1.新疆农业大学食品科学与药学学院,新疆乌鲁木齐830052;2.新疆轻工职业技术学院,新疆乌鲁木齐830021)摘要:以核桃青皮为实验原料,采用醇与碱两种浸提溶剂,对核桃青皮中的有效成分进行提取,分析了两种提取溶剂核桃青皮提取 物对DPPH‘、ABTS+‘、‘OH及O2 •的清除率和还原力测定,并对提取物中总酚含量及对链格孢菌(Atem aria)的抑制效果进行研究。
结果表明,核桃青皮醇提物清除DPPH‘、ABTS+‘、O2 •、‘OH能力均优于碱提法,清除ABTS+‘、O2 •能力及还原力低于对照二丁基羟 基甲苯(BHT);核桃青皮醇提物的总酚含量较高,为36.77 mg/g,是碱提物的1.6倍。
核桃青皮醇提、碱提物对链格孢菌的抑制率分别 为(90.89±1.96)%和(50.71±1.94)%。
核桃青皮醇提物在抗氧化和抑菌方面都有良好的效果,在开发天然抗氧化剂和抑菌剂方面极具 潜力。
关键词:核桃青皮;提取;抗氧化;抑菌中图分类号:TS209 文章编号:0254-5071 (2019)01-0149-05 doi:10.11882/j.issn.0254-5071.2019.01.030引文格式:曹文利,薛雨菲,杨永兴,等.核桃青皮不同溶剂提取物抗氧化及抑菌活性比较[J].中国酿造,2019,38(1): 149-153.Comparison of a ntioxidant and antibacterial activity of w alnut green husk extracts by different solvents CAO Wenli1, XUE Yufei1, YANG Yongxing1, YANG Xi1, LI Fang2, KONG Lingming1*(1.College o f F ood and Pharmacy, Xinjiang A gricultural University,Urumqi 830052, China;2.Xinjiang Light Industry Vocational and Technical College,Urumqi 830021,China)Abstract: Using walnut green husk as the experimental raw material, the effective components were extracted from walnut green husk by ethanol extraction and alkali extraction. The total phenol content, reducing power, scavenging rate of DPPH*, ABTS+*, *OH, 〇2^ and antibacterial effect on Alternaria of extracts from walnut green husk were analyzed. The results showed that the DPPH% ABTS+% 〇2-*and • OH scavenging ability of walnut green husk extract by ethanol extraction was superior to that of extracts by alkali extraction, the ABTS+* and 〇2- • scavenging ability and reducing power was weaker than butylated hydroxytoluene (BHT). The total phenol content in the extract by ethanol extraction was higher (36.77 mg/g), which was 1.6 times that of by alkali extraction. The antibacterial rates of two kinds of the extracts to Alternaria were (90.89±1.96)% and (50.71±1.94)%, respectively. The walnut green husk extracted by ethanol extraction had well effects in antioxidant and antibacterial aspects, and had great potential in the development of natural antioxidants and antibacterial agent.Key words: walnut green husk; extract; antioxidant; antibacterial我国核桃种植面积约667万hm2,产量365万t,位居世 界第一,其种植面积和产量都占世界份额的40%以上[1]。
周婷,吴雪莉,李星洁,等. 三种果汁的抗氧化活性及其对结肠细胞NCM460氧化损伤的保护作用比较[J]. 食品工业科技,2023,44(10):353−361. doi: 10.13386/j.issn1002-0306.2022070108ZHOU Ting, WU Xueli, LI Xingjie, et al. Comparison of Antioxidant Activities of Three Kinds of Juices and Their Protective Effects on Oxidative Damage of Colon Cell NCM460[J]. Science and Technology of Food Industry, 2023, 44(10): 353−361. (in Chinese with English abstract). doi: 10.13386/j.issn1002-0306.2022070108· 营养与保健 ·三种果汁的抗氧化活性及其对结肠细胞NCM460氧化损伤的保护作用比较周 婷1,吴雪莉2,李星洁1,唐克纯2,武首薰1,黄孝懿1,康宇鸿1,夏 锐1,王礼群1,阴文娅1,*(1.四川大学华西公共卫生学院/华西第四医院,四川成都 610041;2.四川省产品质量监督检验检测院,四川成都 610100)摘 要:比较刺梨汁(Rosa roxburghii Tratt juice ,RRTJ )、石榴汁(Pomegranate juice ,PJ )以及蓝莓汁(Blueberry juice ,BJ )的活性成分含量以及抗氧化活性,探究三种果汁对葡聚糖硫酸钠盐(Dextran sulfate sodium ,DSS )诱导人正常结肠上皮细胞NCM460氧化损伤的保护作用。
结果表明,三种果汁中共同含有的生物活性成分有28种,其中刺梨汁的总多酚、总黄酮含量显著高于石榴汁和蓝莓汁(P <0.05),分别为22.77和12.04 mg/mL ;同时,刺梨汁对ABTS +·、DPPH·的清除能力显著高于石榴汁和蓝莓汁(P <0.05),半数清除率(Half scavenging rate ,IC 50)分别为4.00±0.32和10.03±0.51 μL/mL ;Pearson 相关性分析表明果汁的总多酚含量与ABTS +·清除能力呈正相关(P <0.05)。
第50卷第4期2021年4月应用化工Applied Chemical IndustryVol.50No.4Apr.2021多金属含铁氧化物活化过硫酸盐降解有机物研究进展官紫佳,黄海燕(中国石油大学(北京)理学院,北京102249)摘要:国内外学者们研究了不同含铁氧化物作为多相催化剂活化过硫酸盐进行氧化降解反应。
基于过硫酸盐高级氧化技术,综述了多金属含铁氧化物,尤其是磁性材料MFezOHM=Cu、Co、Mn等)活化过硫酸盐技术的研究进展,从制备方法、氧化物特点、降解有机物类型、降解过程、降解效率等方面介绍了不同多金属含铁氧化物活化过硫酸盐过程的特点,同时总结了此过程与其他过硫酸盐活化技术(活性炭活化、电活化)协同处理难降解物质的研究进展,讨论了多金属含铁氧化物活化过硫酸盐降解有机物的特点以及此技术的应用前景。
关键词:含铁氧化物;磁性MFe?0«;过硫酸盐活化;高级氧化;降解有机物中图分类号:TQ209文献标识码:A文章编号:1671-3206(2021)04-1049-07Progress in the degradation of organic matter byactivated persulfate from polymetallic iron oxidesGUAN Zi-jia,HUANG Hai-yan(College of Science,China University of Petroleum(Beijing),Beijing102249,China)Abstract:Scholars have studied different iron oxides as heterogeneous catalysts to activate persulfate for oxidative degradation.Based on the advanced oxidation technology,the paper reviews the research progress in the activation of persulfate by polymetallic iron oxide, especially the magnetic material MFe2O4 (M=Cu,Co,Mn,elc.).The review introduces the characteristics of activated persulfate process of different polymetallic iron oxides from the aspects of preparation methods,characteristics of oxides,types of degradation,organics,the degradation process,and degradation efficiency.The paper summarizes the research progress of this process with other persulfate activation technology(activated carbon activation,e-lectrical activation)in the synergistic treatment of refractory organics,discussed advantages and disadvantages of degradation of organic matter by activated persulfate by the polymetallic iron oxides,and the application prospect of this technology.Key words:iron oxide;magnetic MFe204;persulfate activation;advanced oxidation;degradation of organic matter近年来,过硫酸盐氧化处理技术是现阶段应用比较广泛的高级氧化技术。
差异分析的英文作文英文:Differential analysis is a statistical method used to compare two or more groups and determine if there are significant differences between them. It is commonly usedin scientific research to analyze data and draw conclusions about the effects of different treatments or interventions.To conduct a differential analysis, one must first identify the groups to be compared and the variables of interest. Then, statistical tests such as t-tests or ANOVA can be used to compare the means or distributions of the variables across the groups. If significant differences are found, further analysis can be done to determine the nature and magnitude of the differences.For example, imagine a study comparing the effectiveness of two different treatments for a certain medical condition. One group receives treatment A, whilethe other receives treatment B. Differential analysis canbe used to compare the outcomes of the two groups and determine if one treatment is significantly more effective than the other.Overall, differential analysis is a powerful tool for identifying and understanding differences between groups.It allows researchers to make informed decisions about the best course of action based on the data available.中文:差异分析是一种统计方法,用于比较两个或多个组之间的差异,并确定它们之间是否存在显著差异。
对比法的英语作文In today's society, the use of comparison is a common method of analysis in various fields. Whether it be in literature, science, or everyday decision-making, comparing and contrasting different elements helps us to understand and evaluate their differences and similarities. This essay will explore the use of the comparative method in English literature, science, and everyday decision-making, and discuss its benefits and limitations.In English literature, the comparative method is often used to analyze and understand different literary works. By comparing and contrasting the themes, characters, and writing styles of different authors, readers can gain a deeper understanding of the texts and the messages they convey. For example, by comparing the works of William Shakespeare and Jane Austen, readers can gain insights into the different social and cultural contexts in which these authors wrote, as wellas the different perspectives they bring to their writing. This comparative analysis can enrich readers' understanding and appreciation of literature.In the field of science, the comparative method is used to analyze andevaluate different theories, experiments, and data. Scientists often compare and contrast the results of different studies to identify patterns, trends, and discrepancies. This comparative analysis helps scientists to refine their hypotheses, develop new theories, and make informed decisions about their research. For example, in the field of medicine, comparative studies of different treatments for a particular disease can help doctors and researchers to identify the most effective and safe treatment options for patients.In everyday decision-making, the comparative method is used to evaluate different options and make informed choices. Whether it be choosing between different products, services, or courses of action, people often compare and contrast the features, benefits, and drawbacks of different options to make the best decision. For example, when buying a new car, consumers may compare theprices, fuel efficiency, safety ratings, and customer reviews of different models to choose the best option for their needs and budget.While the comparative method has many benefits in English literature, science, and everyday decision-making, it also has its limitations. In literature, for example, the comparative method can sometimes oversimplify complex texts and overlook the unique qualities of each work. By focusing too much on thesimilarities and differences between texts, readers may miss out on the individual nuances and artistic merits of each work. Similarly, in science, the comparative method can lead to biased interpretations and conclusions if not used carefully. Scientists must be cautious of confounding variables and other factors that may influence the results of their comparative analysis.In everyday decision-making, the comparative method can also be limited by personal biases, preferences, and limited information. People may unconsciously favor certain options over others, leading to biased decision-making. Additionally, the comparative method relies on the availability and accuracy of informationabout different options, which may not always be reliable or complete. As a result, people may make decisions based on incomplete or inaccurate comparative analysis.In conclusion, the comparative method is a valuable tool for analyzing and evaluating different elements in English literature, science, and everydaydecision-making. It helps us to understand and appreciate the differences and similarities between different texts, theories, and options. However, it is important to be mindful of the limitations of the comparative method and use it with caution to avoid oversimplification, bias, and incomplete analysis. Byutilizing the comparative method thoughtfully and critically, we can make informed and thoughtful decisions in various aspects of our lives.。
两种现象做比较的英语作文题目Comparison of Two PhenomenaThe world we live in is a complex and multifaceted place, filled with a myriad of phenomena that captivate our attention and challenge our understanding. In this essay, we will explore and compare two distinct phenomena that have significant impacts on our lives and the broader societal landscape.The first phenomenon we will examine is the rapid advancements in technology and its transformative effects on our daily routines and the way we interact with the world around us. Over the past few decades, we have witnessed an unprecedented surge in technological innovations, from the ubiquitous smartphones that have become extensions of our very beings to the revolutionary breakthroughs in artificial intelligence and automation that are reshaping entire industries. The integration of technology into almost every aspect of our lives has brought about both remarkable conveniences and profound societal shifts.On one hand, the technological revolution has empowered us with unprecedented access to information, communication, andentertainment. With a few taps on our screens, we can instantly connect with loved ones across the globe, access a wealth of knowledge at our fingertips, and immerse ourselves in captivating digital experiences. This has led to a more interconnected world, where geographical boundaries have become increasingly blurred, and the exchange of ideas and cultural experiences has been greatly facilitated.Moreover, the advancements in technology have also transformed the way we work and conduct business. The rise of remote work, cloud-based collaboration, and intelligent automation has enabled greater flexibility, efficiency, and productivity in the workplace. Employees can now work from the comfort of their homes, collaborate seamlessly with teams dispersed across the world, and delegate mundane tasks to intelligent algorithms, freeing up time and resources for more strategic and creative endeavors.However, the ubiquity of technology has also brought about significant challenges and concerns. The constant bombardment of digital stimuli has led to increased levels of distraction, anxiety, and social isolation, as individuals struggle to maintain a healthy balance between their online and offline lives. The reliance on technology has also raised privacy and security concerns, as personal data and sensitive information become increasingly vulnerable to cyber threats and misuse.Furthermore, the rapid pace of technological change has disrupted traditional industries and business models, leading to job displacement and the need for workers to continuously upskill and adapt to new demands. The fear of automation and artificial intelligence replacing human labor has become a source of anxiety for many, as the long-term societal implications of these technological advancements remain uncertain.The second phenomenon we will examine is the growing awareness and concern for environmental sustainability and the urgent need to address the pressing challenges posed by climate change. In recent years, the global community has witnessed a surge in environmental activism, with individuals and organizations alike recognizing the grave consequences of human-induced environmental degradation and the imperative to adopt more sustainable practices.The effects of climate change, such as rising sea levels, extreme weather events, and the depletion of natural resources, have become increasingly evident and pose a significant threat to the well-being of our planet and its inhabitants. This has led to a heightened sense of responsibility and a call for collective action to mitigate the impact of our actions on the environment.One of the most notable manifestations of this environmentalconsciousness is the rise of renewable energy sources, such as solar, wind, and hydropower, as viable alternatives to fossil fuels. Governments, businesses, and individuals are increasingly investing in and adopting these clean energy solutions, driven by a desire to reduce carbon emissions and contribute to a more sustainable future.Additionally, there has been a growing emphasis on sustainable consumption and production practices, with consumers becoming more mindful of their purchasing decisions and the environmental impact of the goods and services they consume. This has led to the proliferation of eco-friendly products, the implementation of circular economy models, and the promotion of sustainable lifestyle choices, such as reducing waste, recycling, and adopting plant-based diets.However, the transition towards environmental sustainability is not without its challenges. The shift away from established industries and practices often faces resistance from vested interests and requires significant financial investments and political will to overcome. Furthermore, the uneven distribution of the impacts of climate change, with developing countries often bearing the brunt of the consequences, has raised questions of global equity and the need for collaborative international efforts to address these complex issues.In conclusion, the comparison of these two phenomena – the technological revolution and the growing environmentalconsciousness – reveals the multifaceted and interconnected nature of the challenges and opportunities we face as a global society. While the advancements in technology have brought about remarkable conveniences and transformative changes, they have also given rise to new concerns and societal disruptions. Similarly, the heightened awareness of environmental sustainability has catalyzed positive changes, but the path towards a truly sustainable future remains fraught with obstacles.As we navigate these complex landscapes, it is crucial that we strive to strike a delicate balance between technological progress and environmental stewardship, leveraging the power of innovation to address the pressing environmental challenges we face. By fostering collaborative efforts, embracing sustainable practices, and cultivating a deeper understanding of the intricate relationships between technology and the natural world, we can work towards a future that is both technologically advanced and environmentally responsible, ensuring the well-being of our planet and the generations to come.。
Journal of Food Science and Engineering 2 (2012)497Comparisons of Antioxidant Capacity, Phenolics, and Flavonoids in Eco-friendly Cultivated and Conventional Cultivated RiceDalin Ly*1 and Seong -gene Lee 21. Royal University of Agriculture, P.O. Box 2696, Phnom Penh, Cambodia2. Department of Biotechnology, Chonnam National University, Gwangju, Republic of Korea*Correspondingauthor’se-mail:****************.khAbstract: Phytochemicals are extensively found at different levels in various plants and are widely recognized for their role in scavenging free radicals, which are involved in the ecology of many chronic diseases. Secondary metabolites play an important role in plant defense mechanism, and increasing evidences indicate that many are important in human health. In this study, the levels of total phenolic content, flavonoid content and antioxidant activities based on oxygen radical absorbance capacity (ORAC) values in eco-friendly cultivated and conventional cultivated rice are conducted to compare in various extracted solvents: water, 80% acetone, 80% ethanol, and 80% methanol. The data analysis results revealed that the eco-friendly cultivated and unpolished rice were consistently found to have higher level of phenolic content, flavonoid content and ORAC values as compared to conventional cultivated and polished rice. There were positive correlation between antioxidant activity and phenolic content of rice were evident. The correlation coefficient of R 2 = 0.96, R 2 = 0.93, R 2 = 0.97 and R 2 = 0.96 with water, 80% acetone, 80% ethanol, and 80% methanol extracts, respectively were found. In addition, the correlation coefficients between flavonoid content and ORAC values of rice were also highly related with various extracts (R 2 = 0.96-0.98). Among the applied solvent, the water, 80% acetone and 80% ethanol were found more effective for phenolic content, flavonoid content and antioxidant measurements, respectively.Key words: Antioxidant capacity, phenolics, flavonoids, eco-friendly cultivated rice, conventional cultivated rice.All Rights Reserved.。
不同营养状态下果蝇的基因表达差异比较IntroductionThe fruit fly (Drosophila melanogaster) is an excellent model organism for studying the genetics of development and gene regulation. One of the key factors that regulate gene expression and development in fruit flies is the nutritional status of the organism. The aim of this article is to compare the gene expression differences between fruit flies in different nutritional states.Nutritional StatesThe nutritional state of the fruit fly is influenced by the quality and quantity of the food it eats. Fruit flies can exist in different nutritional states, including normal, undernourished, overnourished, and food-deprived. In normal nutritional state, fruit flies have access to an adequate amount of nutrients required for survival and reproduction. Undernourished fruit flies are unable to gain access to sufficient nutrients, leading to a decreased body mass and reduced reproductive fitness. Overnourished fruit flies, on the other hand, consume excess nutrients, leading to a higher body mass and reduced lifespan. Food-deprived fruit flies are those that have been starved of food for a specified period.Gene Expression DifferencesSeveral studies have investigated the differences in gene expression between fruit flies in different nutritional states. These studies have identified several differentially expressed genes that are involved in metabolic pathways, stress response, and immune response.Metabolic PathwaysFruit flies regulate their metabolic pathways in response to changes in their nutritional state. For instance, the expression of genes involved in carbohydrate metabolism is altered in fruit flies that are overnourished. Similarly, genes involved in lipid metabolism are differentially expressed in undernourished fruit flies. These changes in gene expression enable fruit flies to adapt to changes in nutrient availability.Stress ResponseFruit flies utilize stress response pathways in order to cope with different nutritional stressors. For example, the expression of heat shock proteins is induced in undernourished fruit flies as a protective mechanism against protein misfolding and aggregation. In contrast, overnourished fruit flies exhibit increased expression of genes involved in oxidative stress response, indicating that they are under increased oxidative stress.Immune ResponseThe expression of immune-related genes is also influenced by the nutritional status of fruit flies. For instance, overnourished fruit fliesexhibit increased expression of genes involved in antimicrobial defense, such as lysozyme and defensin. In contrast, undernourished fruit flies exhibit increased expression of genes involved in wound healing, such as matrix metalloproteinase (Mmp1). These changes in gene expression reflect the altered nutritional state of the fruit flies and their response to the associated stressors.ConclusionIn conclusion, the nutritional status of fruit flies can impact their gene expression profile. Fruit flies in different nutritional states exhibit changes in gene expression associated with metabolic pathways, stress response, and immune response. The understanding of these differences can help us to gain further insight into the role of nutrition in gene regulation and development in fruit flies.。
Journal of Photochemistry and Photobiology A:Chemistry170(2005)45–50Comparison of different advanced oxidation processesfor the degradation of room temperature ionic liquidsPiotr Stepnowski a,∗,Adriana Zaleska ba Faculty of Chemistry,Waste Management Laboratory,University of Gda´n sk,ul.Sobieskiego18/19,80-952Gda´n sk,Polandb Department of Chemical Technology,Chemical Faculty,Gda´n sk University of Technology,ul.Narutowicza11/12,80-952Gda´n sk,PolandReceived7June2004;accepted27July2004Available online1September2004AbstractImidazolium ionic liquids have been widely researched as possible“green”replacements for organic solvents.The“green”aspect is related mainly to their non-measurable vapor pressure,which is obviously not enough to justify calling a technology cleaner.Some quantities of ionic liquids will soon be present in technological wastewater,where,because of their great stability,they could become persistent pollutants and break through classical treatment systems into natural waters.In order to verify future possibilities of their cleanup,three common advanced oxidation processes(UV,UV/H2O2and UV/TiO2)were studied for their applicability in the degradation of imidazolium ionic liquids in aqueous solution.The greatest degradation efficiency for all the compounds studied was achieved with the H2O2/UV system.The stability of imidazolium ionic liquids with respect to all the tested oxidation processes is structure-related.Except for direct photolysis,where the least degradable compounds were OMIM and HMIM,1-ethyl-3-ethylimidazolium was found to be most stable entity among the compounds studied in enhanced photodegradation systems.©2004Elsevier B.V.All rights reserved.Keywords:Ionic liquids;AOPs;Photodegradation;Heterogeneous photocatalysis;Titanium dioxide1.IntroductionRoom temperature ionic liquids have increasingly at-tracted attention as green,high-tech reaction media of the future.They are low-melting-point salts that have been found suitable for catalysis,biocatalytic processing,extraction, electrochemistry or separation[1–4].Typical ionic liquids consist of an organic cation with delocalized charges and a small inorganic anion,most often weakly coordinatingflu-orocations such as BF4−or PF6−[5].Millions of possi-ble cation and anion combinations offer their widely tun-able properties with regard to polarity,hydrophobicity and solvent miscibility behavior.1-Alkyl-3-methylimidazolium and N-alkylpyridinium tetrafluoroborates are two of the most ∗Corresponding author.Tel.:+48583450448;fax:+48583450448.E-mail address:sox@chem.univ.gda.pl(P.Stepnowski).common ionic liquids,remaining in the liquid state over a wide temperature range.The generic structures of these com-pounds are presented in Fig.1.They are nonvolatile,non-flammable,possess high thermal stability and are excellent solvents for a wide range of inorganic and organic materials [6–8].Imidazolium and pyridinium ionic liquids have been widely researched as possible“green”replacements for or-ganic solvents,because of their non-measurable vapor pres-sure.This implies their easier and more efficient re-use in comparison to conventional solvents.A low vapor pressure, however,is generally not enough to justify calling a process or even a whole technology“greener”.Certain amounts of ionic liquids will soon be present in technological wastewa-ters where,because of their high stability,they could become persistent pollutants and break through classical treatment systems into natural waters.Further consequences of their presence in the environment are as yet unknown;the most re-1010-6030/$–see front matter©2004Elsevier B.V.All rights reserved. doi:10.1016/j.jphotochem.2004.07.01946P.Stepnowski,A.Zaleska/Journal of Photochemistry and Photobiology A:Chemistry170(2005)45–50Fig.1.Generic structure and atom numbering of1-alkyl-3-methylimida-zolium(A)and N-methylpyridinium(B)ionic liquid cations.R1:methyl–decyl;R2:methyl–ethyl.cent biological evaluations show that ionic liquids are more toxic towards cells than conventional solvents[9,10].For many years the removal of harmful organic pollutants from waters and wastewaters has been investigated by a va-riety of chemical processes.Among them,oxidation by sev-eral agents such as UV radiation,Fenton’s reagent,or ozone, have been used successfully[11].The resistance of some persistent chemicals to these oxidants has forced the devel-opment of new methodologies known as advanced oxidation processes(AOPs),which employ a combination of several oxidants.The main task of AOPs is to enhance free radi-cals in aqueous solutions.One of the most frequently used AOPs is based on the ultraviolet photolysis of hydrogen per-oxide(H2O2/UV),where radiation below400nm is capable of photolyzing the H2O2molecule.The accepted mechanism for hydrogen peroxide photolysis is cleavage of the molecule into hydroxyl radicals with the quantum yield of two•OH radicals per quantum of radiation monly used AOPs are also based on photocatalytic processes,where the interaction between a semiconductor and the UV radiation produces electron-hole pairs in the surface of the semicon-ductor.These charged points both react with the organic com-pound in water:at one point,redox reactions are responsible for degrading the pollutant,at the other,hydroxyl radicals are generated.The present study compares the effectiveness of three pho-todegradation methods applied to aqueous solutions of se-lected imidazolium ionic liquids.Ultraviolet photodegrada-tion used on its own was compared to UV photolysis of hy-drogen peroxide and photocatalysis on TiO2irradiated with UV light.All these methods have been successfully applied in the degradation of a variety of contaminants,including alka-nes,alkenes,alcohols,phenols,dyes,aromatic compounds, surfactants and halogenated xenobiotics[12–28].They thus make a good starting point for evaluating the kinetics of ionic liquid degradation.2.Materials and methods2.1.Ionic liquidsThe ionic liquids selected for these studies were obtained from the Ionic liquids collection of the working group of Prof. Bernd Jastorff(Center for Environmental Research and Tech-nology,UFT,University of Bremen).They were1-butyl-,1-hexyl-,1-octyl-and1-decyl-3-methylimidazolium chlorides or tetrafluoroborates,1-ethyl-3-ethylimidazolium tetrafluo-roborate;methyl imidazole was used as a reference com-pound.The ionic liquids were used as obtained,without any additional pre-treatment.Solutes were dissolved in water to obtain100mM stock solutions for further treatment.In the case of1-hexyl-and1-octyl-3-methylimidazolium tetrafluo-roborates,dissolution of solutes was enhanced by the addition of0.1%(v:v)of methanol.2.2.Experimental device and methodologyTitanium dioxide(Degussa P25)was used as received. Suspensions were prepared by sonication of100mL of dis-tilled water loaded with50mg P25for30min,25mL of which were dispensed in the reaction cell,together with 0.5mL of a50mM imidazolium ionic liquid stock solution, resulting in a TiO2load of500mg L−1and an ionic liquid concentration of1mM.The solutions were purged with air at aflow rate of5mL min−1for30min prior to and during photolysis;at the same time they were stirred magnetically.The light source was an ozone-free,1000W Xenon arc lamp(Oriel Ltd.).Its output traversed10cm of water to re-move IR irradiation.The light beam was subsequently fo-cused onto theflat window of a jacketed cylindrical fused sil-ica reaction cell(26mL,2.5cm optical path),whose temper-ature was maintained at16◦C by means of a refrigerated cir-culating bath to prevent evaporative losses during prolonged sparging.Sample aliquots(1mL)were withdrawn at appropriate intervals,filtered through a0.2m syringefilter(Chromafil®PET-20/15MS).2.3.ReagentsMonopotassium phosphate and ortho-phosphoric acid 85%used for buffers were purchased from POCh(Gliwice, Poland).Methanol HPLC gradient grade was purchased from Fluka Chemika AG(Buchs,Switzerland)and POCh(Gli-wice,Poland).Deionized water was obtained in-house by treating tap water with a carbonfilter,reversed osmosis,a mixed bed of ion exchangers and a0.45mfilter.2.4.Analytical methodThe analyses were carried out with an assembled sys-tem consisting of an LC10AT vp metering pump(Shimadzu Ltd.),a syringe loading sample injector(Rheodyne)and a UV–vis variable wavelength detector(Kontron Instruments). Retention times were recorded with a3390A HPLC integra-tor(Hewlett Packard).All separations were performed using a Kromasil100-5(C-8)reverse phase column.The column dimension was250mm×4.6mm i.d.The analyses were per-formed at ambient temperature at aflow rate of1.0mL min−1. The elution profiles were monitored at220nm.The separa-tion column was equilibrated with the mobile phase untilP .Stepnowski,A.Zaleska /Journal of Photochemistry and Photobiology A:Chemistry 170(2005)45–5047Fig.2.Influence of UV irradiation on the degradability of imidazolium ionic liquids.the baseline was stabilized.Sample injections (10L)were made at this point.The mobile phase was water-methanol (from 80:20to 60:40(v:v))mixed with the KH 2PO 4/H 3PO 4(40mM)buffer at pH 3.1.3.Results and discussion 3.1.UV photolysis of ionic liquidsThis study to assess the influence of UV radiation on the stability of imidazolium ionic liquids was conducted primar-ily to determine the role of radiation alone,and when used in combination with hydrogen peroxide or a photocatalyst.This information can also be quite helpful in the prediction ofenvi-Fig.3.Effect of H 2O 2on the direct photodegradation of imidazolium ionic liquids.ronmental fate,especially in the estimation of the long-term degradation of the analyzed compounds in surface waters.The results of ionic liquid degradation due to UV irradia-tion alone are presented in Fig.2.Within the system stud-ied here,1-butyl-3-methylimidazolium displays the highest degradability.After 360min of irradiation more than 55%of BMIM is degraded.In the case of 1-hexyl-and 1-octyl-3-methylimidazolium as well as 1-ethyl-3-ethylimidazolium species,irradiation degrades only 10–15%of these ionic liq-uids.Methyl imidazole,used here as a reference molecule (it has no n -alkyl chain substitution on N-3),is more resis-tant to irradiation than BMIM and only 35%of this com-pound is removed after 360min.In the case of the 1-alkyl-3-methylimidazolium species,the photodegradation rate cor-relates with the n -alkyl chain length substituted in the N-148P .Stepnowski,A.Zaleska /Journal of Photochemistry and Photobiology A:Chemistry 170(2005)45–50Fig.4.Photocatalysis of imidazolium ionic liquids in the UV/TiO 2system.position.1-Butyl-3-methylimidazolium compounds,which have only four carbons in the chain,degrade much faster than HMIM or OMIM,which have six-and eight-carbon chains,respectively.The shortest chain compound (1-ethyl-3-ethylimidazolium cation)should not be included in this com-parison,because N-1here is substituted with an ethyl group instead of the methyl group present in all other compounds.3.2.Effect of H 2O 2on direct photodegradationExperiments were undertaken to examine the effect of H 2O 2on the degradation of ionic liquids enhanced with UV irradiation.H 2O 2is readily photolyzed to produce •OH rad-icals,and UV/H 2O 2technology is a well-known advanced oxidation process for organic compound degradation.At first,screening for optimized hydrogen peroxide was per-formed by investigating the degradation of the 1-hexyl-3-methylimidazolium entity using 0.05and 0.5%H 2O 2.As shown in Fig.3,a higher peroxide concentration results in a rapid increase in the apparent quantum yield,and after 60min of the experiment more than 90%of the starting HMIM is de-graded.Therefore,in order to follow the differences between the degradabilities of the other compounds in the system un-der study,a H 2O 2concentration of 0.05%was chosen for the further experiments.Fig.3presents the results of the H 2O 2-enhanced photodegradation of all the ionic liquids studied.Degradability in this system decreases in the order BMIM <HMIM <OMIM <EEIM,and like UV degradation,it depends on the length of the alkyl chain substituted at posi-tion N-1of the 1-alkyl-3-methylimidazolium species.What is different from the UV system degradation is the order of this sequence.The 1-ethyl-3-ethylimidazolium entity is less degradable than OMIM and HMIM (this order is reversed in direct photolysis)and after 360min 40%of the starting EEIM is lost.It is also noted that this level of degradation is already reached after 180min (and does not change overthe next 180min of the experiment),which might be related to the much higher hydroxyl radical rate constant for this particular compound in comparison to the remaining ionic liquids.1-octyl-3-methylimidazolium was practically non-degradable in the presence of UV light,and a rate-enhancing effect after the addition of H 2O 2is clearly observed;how-ever,the degradation curve does not really match first-order kinetics.For 1-hexyl-and 1-butyl-3-methylimidazolium en-tities,degradation rates are much higher in comparison to direct photolysis,and within the experimental time range,approximately 70and 85%of these compounds is degraded respectively.3.3.Photocatalysis of ionic liquidsNear-UV irradiation of TiO 2semiconductor material gen-erates charge carriers (conduction-band electrons and valence band holes),which react with available adsorbates (OH −,H 2O)on the surface of the crystal.The highly oxidative valence-band holes may react directly with sorbed organic compounds,or oxidize them indirectly by the formation of •OH radicals.Degradation of ionic liquids in the UV/TiO2system is illustrated in Fig.4.Photocatalysis of EEIM,HMIM and OMIM is much slower than photosensitized degradation with hydrogen peroxide.In the case of the most resistant 1-ethyl-3-ethylimidazolium,its degradation rate is compa-rable to direct photolysis (15%loss after 360min).HMIM and OMIM exhibit comparable degradability in the system studied and the presence of the semiconductor only slightly enhances their degradation rates.After 360min of the ex-periment approximately 23%of both ionic liquids is lost.In contrast,a very effective degradation rate is observed for 1-butyl-3-methylimidazolium,which is almost completely de-graded within the experimental time.A rapid degradation rate is observed for methyl imidazole,for which degradation is complete after 180min.P.Stepnowski,A.Zaleska/Journal of Photochemistry and Photobiology A:Chemistry170(2005)45–50494.ConclusionsDegradation of imidazolium ionic liquids was performed using three different advanced oxidation processes.The H2O2/UV system was found the most effective as regards the degradation of all the compounds.Except for direct pho-tolysis,in which OMIM and HMIM were degraded to a lesser extent,1-ethyl-3-ethylimidazolium was found to be most sta-ble entity among the compounds studied in enhanced pho-todegradation systems,where a free radical cation is believed to play a major role in the degradation process.Therefore, elongating the3-methyl substituent of an imidazolium ionic liquid by one CH2group significantly decreases degrad-ability.It is known that the presence of a methyl functionality in a quaternary amine enhances its degradability,especially in biological systems,and it is likely that the same effect is observed here.In the case of a methyl group substituted di-rectly at the quaternary nitrogen,the C H bonds are much more polarized and therefore easier to break than the same system separated with a CH2group.A far as the other ionic species are concerned,their degradability correlates di-rectly with the length of the N-1n-alkyl substituent.The most stable1-alkyl-3-methylimidazolium species is the1-octyl-compound,the least stable is the1-butyl-entity.Despite the evident correlation,it must be stressed that the degradability results obtained are net observations of more than few effects depending on the atoms type and number but also conforma-tion of the molecule.The n-alkyl chain seems to be respon-sible for the stability of imidazolium ionic liquids.These fragments can undergo various geometric intramolecular in-teractions in aqueous solutions such asflexing or strengthen-ing as a result of solvation forces around positively charged nitrogen atoms.This can additionally improve resistance to photodegradation.Our results show that octyl-and hexyl-substituents at position N-1and an ethyl-substituent at po-sition N-3in particular are of just the right length to con-fer stability on imidazolium ionic liquids.It is imperative that these observations be taken into consideration when de-signing real“green”chemicals,which should be excellent neoteric solvents not only from the technological point of view,but also with regard to their fate and persistence in the environment.Future research will focus on evaluating degradation pro-cesses of other classes of ionic liquids,such as pyridinium or phosphonium compounds.In addition,identification of the degradation products obtained in different AOP systems by means of LC–MS will be undertaken. 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