TCA 蛋白沉淀方法
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100%(w/v)三氯乙酸得配制方法:500g三氯乙酸用227ml水来溶解,所得溶液即100%三氯乙酸溶液.避光,4度保存.(preparation of 100%TCA: 454ml H2O/kg TCA、Maintain in darkbottleat4oC、Becareful,use gloves!!!)、培养基上清直接电泳跑出来得条带经常很难瞧,可以TCA沉淀浓缩后跑电泳,一般表达量大于1mg/ml可以瞧到明显条带,这就是我用得TCA沉淀方法,效果很好:1、菌液10000g,离心5分钟,收集表达上清。
2、取500-1000ul上清于EP管中,加入1/9体积得100%TCA,颠倒10次混匀。
3、样品置于冰浴中大于0、5小时,过夜效果更好.4、15000g,离心10-20分钟,可见有棕黑色沉淀,倒掉上清,将EP管倒扣在吸水纸上轻轻控几下,除去残余在管口得液体。
5、将EP管倒置于吸水纸长,37度烘箱10—20分钟,待管底无明显液体残留,如果管壁还残留有液体,可以吸水纸吸掉。
可以改成室温或用电吹风,关键就是除去管底与管壁残余液体.6、15000g,离心10-20分钟,用20ul枪头尽量吸去管底残余得液体,此步骤要快,不然沉淀容易散开,降低蛋白回收率,一般最多几ul或者没有,注意不要吸到沉淀.7、EP管倒置于吸水纸长,37度烘箱5分钟,确认管壁与管底没有液体残留。
8、加入20-50ul Loading buffer,95度加热10nim,一般沉淀会自动溶解,如果不溶,用手指轻弹管壁或用20ul枪头轻轻吸打,注意整个操作尽量不要碰到管壁,因为管壁可能沾有残余TCA。
如果蓝色得Loadingbuffer 不变成黄色,说明残余TCA吸弃了干净,如果变黄,一般不影响电泳。
此方法连丙酮洗这一步都省了,而且不影响电泳效果。
或者第5步与第6步改为丙酮洗:5、加入200ul冰冷得丙酮,用手指轻弹EP管,洗去管底与管壁残余得TCA.6、15000g,离心10-20分钟,倒掉上清,将EP管倒扣在吸水纸上轻轻控几下,除去残余在管口得液体.TCA—DOCFor precipitation of very low protein concentration1) To one volume of proteinsolution,add 1/100vol、of 2%DOC (Na deoxycholate, detergent)、2)Vortex andlet sit for 30min at 4oC、ﻫ3)Add1/10 ofTrichloroaceti cacid(TCA)100%vortex andlet sitON at 4oC (preparation of100% TC A:454mlH2O/kgTCA、Maintain indark bottleat4oC、Be careful,use gloves!!!)、4)Spin 15min4oC in microfugeat maximum speed(15000g)、Carefu llydischarge supernatant and retain the pellet: drytube by inversion ontissuepaper(pellet may bedifficult to see)、[OPTION: Washpellettwi ce with one volumeof cold acetone(acetone keep at–20oC)、Vor tex and repellet samples 5min atfull speed betweenwashes]、5)Dry samples under vaccum(speed vac) ordryair、For PAGE—SDS, resuspend samples in aminimal volumeof samplebuffer、(The presence of some TCAcan givea yellow colour as aconseque nceof the acidificationof the sample buffer; titratewith 1N NaOH or 1M TrisHClpH8、5toobtain the normal blue samplebuffer colour、)Normal TCAﻫTo eliminateTCA soluble interferences and protein concentr ation1) To a sample ofprotein solutionadd Trichloroacetic acid(TCA) 100% to get13%final concentration、Mix and keep 5min–20oCand then 15min 4oC;or longertime at4oC withoutthe –20oC stepforlower protein concentration、Suggestion: leave ON ifthe proteinconcentration isverylow、ﻫ(preparation of100%TCA:454ml H2O/kgTCA、Maintain in darkbottleat 4oC、Be careful,use gloves!!!)、2) Spin 15min 4oC inmicrofuge at maximumspeed (15000g)、Carefully discharge supernatant and retain the pellet: dry tubeby inversion on tissue paper (pellet may be difficult tosee)、ﻫ3)For PAGE—SDS,resuspendsamplesina minimal volumeof sample buffer、(Thepresence of some TCA can give ayellow colourasaconsequenceof theacidification ofthe sample buffer ; titrate with 1N NaOH or 1M TrisHClpH8、5 to obtainthe normal blue samplebuffercolour、) ﻫAcetone PrecipitationﻫTo eliminate acetone soluble interferencesand proteinconcentration1) Add to1volume of protein solution 4 volumesof coldacetone、Mix andkeepatleast 20min –20oC、(Suggestion:leave ONifthe pro tein concentrationis very low)、ﻫ2) Spin15min4oC inmicrofugeat maximumspeed (15000g)、Carefully discharge supernatant and retain the pellet:dry tube byinversionon tissuepaper (pelletmaybe difficult to see)、ﻫ3) Dry samplesunder vaccum(speed-vac)or dry air toeliminateanyacetone residue (smell tubes)、For PAGE—SDS, resuspend samples in a minimal volume of sample buffer、EthanolPrecipitationUseful methodto concentrateproteinsandremoval of Guanidine Hydrochloride before PAGE-SDS1)Add to 1 volume ofproteinsolution 9 volumes of cold Ethanol100%、Mix andkeep at least 10min、at –20oC、(Suggestion: leave ON)、2)Spin 15min 4oC in microcentrifuge atmaximumspeed(15000g)、Carefully discharge supernatantandretain the pellet: dry tube by inversion ontissue paper(pellet maybe difficult to see)、3)Wash pellet with 90%cold ethanol(keepat–20oC)、Vortex andrepellet samples 5minat full speed、ﻫ4)Dry samples under vaccum (speedvac) or dryair toeliminate any ethanolresidue(smell tubes)、For PAGE-SDS, resuspendsamples in a minimal volume of sample buffer、ﻫTCA-DOC/AcetoneﻫUseful methodto concentrate proteins and removeacetone and TCA soluble interferences1、To one volume ofproteinsolution add2%Nadeoxycholate (DO C) to 0、02% final(for100μl sample, add 1 μl2% DOC)、2、Mix and keepat room temperature for atleast 15 min、3、100% trichloroacetic acid(TCA) toget 10% final concentration(pre paration of100%TCA:454ml H2O/kgTCA、Maintainindark bottl eat 4oC、Be careful, usegloves!!!)、ﻫ4、Mix andkeep at room temperature forat least 1hour、ﻫ5、Spinat 4oC for10 min, removesupernatan tandretain the pellet、Dry tube by inversion on tissuepaper、ﻫ6、Add200 μl of ice cold acetone toTCA pellet、ﻫ7、Mix and keeponice forat leas t15 min、8、Spin at 4oC for10 min in microcentrifuge at maximum speed、9、Remove supernatant as before(5), dry airpellet toeliminate anyacetone residue (smell tubes)、For PAGE—SDS,resuspendsamples inaminimal volume of samplebuffer、ﻫ10、(Thepresence ofsomeTCA can giveayellow colour as a consequence ofthe acidificationof the sample buffer; titrate with 1N NaOH or 1M TrisHCl pH8、5to obt ain the normal blue sample buffercolour、)Acidified Acetone/MethanolﻫUsefulmethod to remove acetone and methanolsoluble interferences like SDS before IEF1)Prepare acidified acetone: 120mlacetone + 10μl HCl (1mMfinalco ncentration)、2) Prepare precipitation reagent: Mix equalvolumesof acidified acetone andmethanoland keep at—20oC、3)Toone volume of protein solution add 4volumes of coldprecipitation reag ent、Mixand keep ONat—20oC、4)Spin 15min 4oC in microfuge atmaximumspeed (15000g)、Carefull ydischarge supernatant and retain thepellet:dry tube by inversionon tis sue paper (pellet maybe difficultto see)、ﻫ5)Dry samplesunder vaccum(speed-vac)ordry air toeliminate any acetone or methanol residue (smell tubes)、TCA—Ethanol PrecipitationUseful methodto concentrate proteinsand removalof Guanidine Hydrochloride beforePAGE—SDS1)Dilute10—25μl samplesto100μl with H2OAdd100μl of20%trichloroaceticacid(TCA) and mix(preparation of 100%TCA:454mlH2O/kg TCA、Maintain indark bottleat4oC、Be careful, use gloves!!!)、ﻫ2)Leavein ice for 20min、Spin at 4oC for 15 min in microcentrifuge atmaximumspeed、ﻫ3)Carefully discharge s upernatantand retainthe pellet:dry tubeby inversion on tissue(pellet m4)Wash pelletwith 100μlice—cold ethanol,ay be difficult tosee)、ﻫdry and resuspend in sample buffer、5)In casethere are traces of GuHCl present,samples should beloadedimmediately after boiling for 7min at 95°C ﻫ6)(The presence of some TCA can give a yellow colour as a consequence of the acidification of thesample buffer ;titrate with1N NaOH or1M TrisHCl pH8、5 to obtain the normal bluesample buffer colour、)ﻫPAGE prepTM Protein Clean-up and EnrichmentKit — PIERCEThe PAGEprep?Kitenables removal ofmany chemicals tha tinterfere with SDS-PAGEanalysis:guanidine,ammonium sulfate, other mon salts, acidsandbases,detergents,dyes, DNA,RNA,and lipids、PIERCE:#26800- PAGEprepTMProteinClean—up and EnrichmentKit(pdf)ChloroformMethanol PrecipitationﻫUseful methodforRemovalof s altand detergents1)To sample of startingvolume100ul2) Add 400 ul methanol3)Vortex wellﻫ4)Add 100 ul chloroform5) Vortexﻫ6)Add300ulH2O7)Vortexﻫ8)Spin 1 minute 14,0000g9)Remove top aqueouslayer (protein is betweenlayers)10) Add 400ul methanolﻫ11)Vortex12)Spin 2 minutes14,000 g13)Removeas muchMeOH aspossible without disturb14)Speed—Vactodrynessing pelletﻫ15)Bring upin2X sample bufferforPAGE。