细菌分类大全

初一生物细菌的分类总结细菌是一类微生物，广泛存在于自然界中。

它们的分类可以根据形态、结构、代谢方式和氧需求等多个方面进行划分。

本文将对初一生物课程中所学的细菌分类进行总结。

一、形态分类细菌的形态分类是根据它们的形状和结构特征来区分的。

1. 球状细菌（Coccus）：这类细菌呈圆形，在显微镜下观察，它们看起来像小颗粒。

常见的球状细菌有葡萄球菌和链球菌。

2. 杆状细菌（Bacillus）：这类细菌呈长柱状，外形像细长的棍子。

大肠杆菌和炭疽杆菌就属于杆状细菌。

3. 螺旋细菌（Spirillum）：这类细菌呈螺旋状，外形像一根螺旋线。

铜绿假单胞菌和酿酒酵母就属于螺旋细菌。

二、结构分类细菌的结构分类主要考虑细菌体内是否有细胞壁和细胞膜的组成。

1. 革兰氏阳性菌（Gram-positive）：这类细菌的细胞壁含有厚厚的脂肪酸，显著染紫色。

革兰氏阳性菌包括葡萄球菌和链球菌。

2. 革兰氏阴性菌（Gram-negative）：这类细菌的细胞壁相对较薄，不易染色。

革兰氏阴性菌包括大肠杆菌和沙门氏菌。

三、代谢方式分类细菌的代谢方式分类是根据细菌的能量来源和碳源来区分的。

1. 好氧菌（Aerobic）：这类细菌需要氧气来进行代谢。

好氧菌包括绿色光合细菌和蓝藻菌。

2. 厌氧菌（Anaerobic）：这类细菌在缺氧环境下进行代谢，无需氧气。

厌氧菌包括产气荚膜梭菌和硫酸还原细菌。

四、氧需求分类细菌的氧需求分类考虑到细菌对氧气的需求量。

1. 嗜氧菌（Obligate aerobes）：这类细菌只能在充足的氧气条件下生长和繁殖。

典型的嗜氧菌有拟杆菌和放线菌。

2. 厌氧菌（Obligate anaerobes）：这类细菌只能在无氧环境中生长和繁殖。

典型的厌氧菌有产气荚膜梭菌和柱状硫杆菌。

3. 兼性厌氧菌（Facultative anaerobes）：这类细菌既可以在有氧条件下生长，也可以在无氧条件下生长。

典型的兼性厌氧菌是大肠杆菌和乳酸菌。

细菌的形态与分类细菌是一类微小的单细胞生物，它们存在于各种环境中，包括土壤、水体、空气中，甚至在我们自身的身体内部。

尽管细菌看起来微不足道，但它们在生态系统和人体健康中起着至关重要的作用。

了解细菌的形态和分类对我们理解它们的功能和重要性至关重要。

一、细菌的形态细菌的形态可以分为多种类型，包括球菌、杆菌、弧菌和螺旋菌。

1. 球菌（coccus）：球菌是一种圆形细胞，可以单个存在，也可以形成群体。

它们的外形像小球或椭圆形。

球菌有时也会形成长链状结构，这些链条常见于链球菌属。

2. 杆菌（bacillus）：杆菌是一种棒状的细胞，长度较长，直径较小。

杆菌可以单个存在，也可以成对或成链形成。

大肠杆菌是一种常见的杆菌，它在消化道中起着重要的生理功能。

3. 弧菌（vibrio）：弧菌是一种呈现弯曲形的细菌。

它们通常是透明的，某些弧菌可以在水体中引起疾病，如霍乱菌。

4. 螺旋菌（spirillum）：螺旋菌是一种螺旋状的细胞，看起来像螺旋形的弹簧。

螺旋菌的外形多样，有的形状像弯曲的棒状细胞，有的则呈现波浪形。

马拉里克酸螺旋菌是一种引起梅毒的螺旋菌。

二、细菌的分类细菌的分类是根据它们的形态、代谢方式、环境需求以及基因序列等多个因素进行的。

1. 形态分类：根据细菌的形态，可以将其归类为球菌、杆菌、螺旋菌和弧菌等不同类型，如前文所提到的。

2. 代谢分类：细菌的代谢方式也是分类的依据之一。

根据细菌对氧气的需求，可以将其分为需氧菌（需要氧气进行呼吸）、厌氧菌（不需要氧气进行呼吸）和兼性厌氧菌（既可以进行氧呼吸，也可以进行厌氧代谢）等。

3. 营养分类：细菌的营养需求也被用来进行分类。

根据其对有机物和无机物的需求，细菌可以分为自养细菌和异养细菌。

自养细菌能够从无机物中合成所需的有机物，而异养细菌则依赖于外界提供的有机物。

4. 基因序列分类：随着分子生物学的发展，基因序列也成为细菌分类的重要依据。

通过比较细菌的基因序列，可以揭示它们之间的亲缘关系，进而进行分类。

细菌分类表（按“界门纲目科属种”分类）生物分类总表生物病毒分类表古菌分类表细菌分类表原生生物分类表藻类分类表 (NCBI)真菌分类表植物分类表植物分类表 (NCBI)APG I、II、III克朗奎斯特分类动物分类表软体动物分类表环节动物分类表昆虫分类表鱼类分类表两栖动物分类表爬行动物分类表鸟类传统分类系统鸟类DNA分类系统鹦形目分类表哺乳动物分类表翼手目分类表• 1 酸杆菌门(Acidobacteria)o 1.1 酸杆菌纲(Acidobacteria)o 1.2 全噬菌纲(Holophagae)• 2 放线菌门(Actinobacteria)（高G+C革兰氏阳性菌）o 2.1 放线菌纲(Actinobacteria)• 3 产水菌门(Aquificae)o 3.1 产水菌纲(Aquificae)• 4 拟杆菌门(Bacteroidetes)o 4.1 拟杆菌纲(Bacteroidetes)o 4.2 黄杆菌纲(Flavobacteria)o 4.3 鞘脂杆菌纲(Sphingobacteria)o 4.4 纲未定• 5 衣原体门(Chlamydiae)o 5.1 衣原体纲(Chlamydiae)• 6 绿菌门(Chlorobi)o 6.1 绿菌纲(Chlorobia)•7 绿弯菌门(Chloroflexi)o7.1 厌氧绳菌纲(Anaerolineae)o7.2 暖绳菌纲(Caldilineae)o7.3 绿弯菌纲(Chloroflexi)•8 产金菌门(Chrysiogenetes)o8.1 产金菌纲(Chrysiogenetes)•9 蓝藻门(Cyanobacteria)o9.1 蓝藻纲(Cyanobacteria)•10 脱铁杆菌门(Deferribacteres)o10.1 脱铁杆菌纲(Deferribacteres)•11 异常球菌-栖热菌门(Deinococcus-Thermus) o11.1 异常球菌纲(Deinococci)•12 网团菌门(Dictyoglomi)o12.1 网团菌纲(Dictyoglomi)•13 纤维杆菌门(Fibrobacteres)o13.1 纤维杆菌纲(Fibrobacteres)•14 厚壁菌门(Firmicutes)（低G+C革兰氏阳性菌）o14.1 芽孢杆菌纲(Bacilli)o14.2 梭菌纲(Clostridia)o14.3 热石杆菌纲(Thermolithobacteria)•15 梭杆菌门(Fusobacteria)o15.1 梭杆菌纲(Fusobacteria)•16 芽单胞菌门(Gemmatimonadetes)o16.1 芽单胞菌纲(Gemmatimonadetes)•17 黏胶球形菌门(Lentisphaerae)o17.1 黏胶球形菌纲(Lentisphaerae)•18 硝化螺旋菌门(Nitrospirae)o18.1 硝化螺旋菌纲(Nitrospira)•19 浮霉菌门(Planctomycetes)o19.1 浮霉菌纲(Planctomycetacia)•20 海绵杆菌门(Poribacteria)*•21 变形菌门(Proteobacteria)o21.1 α-变形菌纲(Alphaproteobacteria)o21.2 β-变形菌纲(Betaproteobacteria)o21.3 δ-变形菌纲(Deltaproteobacteria)o21.4 ε-变形菌纲(Epsilonproteobacteria)o21.5 γ-变形菌纲(Gammaproteobacteria)•22 螺旋体门(Spirochaetes)o22.1 螺旋体纲(Spirochaetes)•23 柔膜菌门(Tenericutes)o23.1 柔膜菌纲(Mollicutes)•24 热脱硫杆菌门(Thermodesulfobacteria)o24.1 热脱硫杆菌纲(Thermodesulfobacteria)•25 热微菌门(Thermomicrobia)o25.1 热微菌纲(Thermomicrobia)•26 热袍菌门(Thermotogae)o26.1 热袍菌纲(Thermotogae)•27 疣微菌门(Verrucomicrobia)o27.1 丰祐菌纲(Opitutae)o27.2 疣微菌纲(Verrucomicrobiae)•28 门未定o28.1 纤线杆菌纲(Ktedonobacteria)酸杆菌门(Acidobacteria)酸杆菌纲(Acidobacteria)1.酸杆菌目(Acidobacteriales)1.酸杆菌科(Acidobacteriaceae)1.酸杆菌属(Acidobacterium)2.(Edaphobacter)3.(Terriglobus)全噬菌纲(Holophagae)1.石鳖杆菌目(Acanthopleuribacterales)1.石鳖杆菌科(Acanthopleuribacteraceae)1.石鳖杆菌属(Acanthopleuribacter)2.全噬菌目(Holophagales)1.全噬菌科(Holophagaceae)1.地发菌属(Geothrix)2.全噬菌属(Holophaga)放线菌门(Actinobacteria)（高G+C革兰氏阳性菌）放线菌纲(Actinobacteria)1.酸微菌亚纲(Acidimicrobidae)1.酸微菌目(Acidimicrobiales)1.酸微菌亚目(Acidimicrobineae)1.酸微菌科(Acidimicrobiaceae)1.酸微菌属(Acidimicrobium)2.(Iamiaceae)1.(Iamia)2.放线菌亚纲(Actinobacteridae)1.放线菌目(Actinomycetales)1.放线菌亚目(Actinomycineae)1.放线菌科(Actinomycetaceae)1.放线棒菌属(Actinobaculum)2.放线菌属(Actinomyces)3.隐秘杆菌属(Arcanobacterium)4.(Falcivibrio)5.动弯杆菌属(Mobiluncus)6.(Varibaculum)2.(Actinopolysporineae)1.(Actinopolysporaceae)1.(Actinopolyspora)3.(Catenulisporineae)1.(Actinospicaceae)1.(Actinospica)2.(Catenulisporaceae)1.(Catenulispora)4.棒杆菌亚目(Corynebacterineae)1.棒杆菌科(Corynebacteriaceae)1.(Bacterionema)2.(Caseobacter)3.棒杆菌属(Corynebacterium)4.(Turicella)2.迪茨氏菌科(Dietziaceae)1.迪茨氏菌属(Dietzia)3.分枝杆菌科(Mycobacteriaceae)1.分枝杆菌属(Mycobacterium) （含结核杆菌）4.诺卡氏菌科(Nocardiaceae)1.戈登氏菌属(Gordonia)2.(Micropolyspora)3.(Millisia)4.诺卡氏菌属(Nocardia)5.红球菌属(Rhodococcus)6.斯科曼氏菌属(Skermania)7.(Williamsia)8.(Smaragdicoccus)5.(Segniliparaceae)1.(Segniliparus)6.束村氏菌科(Tsukamurellaceae)1.束村氏菌属(Tsukamurella)5.弗兰克氏菌亚目(Frankineae)1.酸热菌科(Acidothermaceae)1.酸热菌属(Acidothermus)2.弗兰克氏菌科(Frankiaceae)1.弗兰克氏菌属(Frankia)3.地嗜皮菌科(Geodermatophilaceae)1.芽球菌属(Blastococcus)2.地嗜皮菌属(Geodermatophilus)3.(Modestobacter)4.(Kineosporiaceae)1.(Cryptosporangium)2.(Kineococcus)3.(Kineosporia)5.(Nakamurellaceae)1.(Humicoccus)2.(Nakamurella)3.(Quadrisphaera)6.孢鱼菌科(Sporichthyaceae)1.孢鱼菌属(Sporichthya)6.糖霉菌亚目(Glycomycineae)1.糖霉菌科(Glycomycetaceae)1.糖霉菌属(Glycomyces)2.(Stackerbrandtia)7.微球菌亚目(Micrococcineae)1.获山氏菌科(Beutenbergiaceae)1.获山氏菌属(Beutenbergia)2.乔治菌属(Georgenia)3.萨勒河菌属(Salana)2.博戈里亚湖菌科(Bogoriellaceae)1.博戈里亚湖菌属(Bogoriella)3.短杆菌科(Brevibacteriaceae)1.短杆菌属(Brevibacterium)4.纤维素单胞菌科(Cellulomonadaceae)1.纤维素单胞菌属(Cellulomonas)2.厄氏菌属(Oerskovia)3.(Tropheryma)5.(Dermabacteraceae)1.(Brachybacterium)2.(Dermabacter)6.(Dermacoccaceae)1.(Demetria)2.(Dermacoccus)3.(Kytococcus)7.(Dermatophilaceae)1.(Dermatophilus)2.(Kineosphaera)8.(Intrasporangiaceae)1.(Arsenicicoccus)2.(Humihabitans)3.(Intrasporangium)4.(Janibacter)5.(Knoellia)6.(Kribbia)7.(Lapillicoccus)8.(Ornithinicoccus)9.(Ornithinimicrobium)10.(Oryzihumus)11.(Serinicoccus)12.(Terrabacter)13.(Terracoccus)14.(Tetrasphaera)9.(Jonesiaceae)1.(Jonesia)10.(Microbacteriaceae)1.(Agreia)2.(Agrococcus)3.(Agromyces)4.(Aureobacterium)5.(Clavibacter)6.(Cryobacterium)7.(Curtobacterium)8.(Frigoribacterium)9.(Frondicola)10.(Gulosibacter)11.(Labedella)12.(Leifsonia)13.(Leucobacter)14.(Microbacterium)15.(Microcella)16.(Mycetocola)17.(Okibacterium)18.(Plantibacter)19.(Pseudoclavibacter)20.(Rathayibacter)21.(Rhodoglobus)22.(Salinibacterium)23.(Subtercola)24.(Yonghaparkia)25.(Zimmermannella)11.微球菌科(Micrococcaceae)1.(Acaricomes)2.节杆菌属(Arthrobacter)3.(Citricoccus)4.(Kocuria)5.微球菌属(Micrococcus)6.(Nesterenkonia)7.(Renibacterium)8.罗氏菌属(Rothia)9.口腔球菌属(Stomatococcus)10.刘志恒菌属(Zhihengliuella)12.(Promicromonosporaceae)1.(Cellulosimicrobium)2.(Isoptericola)3.(Myceligenerans)4.(Promicromonospora)5.(Xylanibacterium)6.(Xylanimonas)13.(Rarobacteraceae)1.(Rarobacter)14.(Sanguibacteraceae)1.血杆菌属(Sanguibacter)15.(Yaniaceae)1.(Yania)16.科未定1.(Actinotalea)2.(Demequina)3.(Phycicoccus)4.(Ruania)8.微单孢菌亚目(Micromonosporineae)1.微单孢菌科(Micromonosporaceae)1.(Actinocatenispora)2.(Actinoplanes)3.(Amorphosporangium)4.(Ampullariella)5.(Asanoa)6.(Catellatospora)7.(Catenuloplanes)8.(Couchiolanes)9.(Dactylosporangium)10.(Krasilnikovia)11.(Longispora)12.(Luedemannella)13.微单孢菌属(Micromonospora)14.(Pilimelia)15.(Planopolyspora)16.(Polymorphospora)17.(Salinispora)18.(Spirilliplanes)19.(Verrucosispora)20.(Virgisporangium)9.丙酸杆菌亚目(Propionibacterineae)1.(Nocardioidaceae)1.(Actinopolymorpha)2.(Aeromicrobium)3.(Friedmanniella)4.(Hongia)5.(Kribbella)6.(Marmoricola)7.(Micropruina)8.(Nocardioides)9.(Pimelobacter)10.(Propionicicella)11.(Propionicimonas)2.丙酸杆菌科(Propionibacteriaceae)1.河口微菌属(Aestuariimicrobium)2.(Arachnia)3.(Brooklawnia)4.(Granulicoccus)5.江氏菌属(Jiangella)6.(Luteococcus)7.(Microlunatus)8.丙酸杆菌属(Propionibacterium)9.(Propioniferax)10.(Propionimicrobium)11.(Tessaracocccus)10.(Pseudonocardineae)1.(Actinosynnemataceae)1.(Actinokineospora)2.(Actinosynnema)3.(Lechevalieria)4.(Lentzea)5.(Saccharothrix)6.(Umezawaea)2.(Pseudonocardiaceae)1.(Actinoalloteichus)2.(Actinobispora)3.(Amycolata)4.(Amycolatopsis)5.(Crossiella)6.(Faenia)7.(Goodfellowia)8.(Kibdelosporangium)9.(Kutzneria)10.(Prauserella)11.(Pseudoamycolata)12.(Pseudonocardia)13.(Saccharomonospora)14.(Saccharopolyspora)15.(Streptoalloteichus)16.(Thermobispora)17.(Thermocrispum)11.链霉菌亚目(Streptomycineae)1.链霉菌科(Sterptomycetaceae)1.(Actinopycnidium)2.(Actinosporangium)3.(Chainia)4.(Elytrosporangium)5.北里菌属(Kitasatoa)6.北里孢菌属(Kitasatospora)7.(Microellobosporia)8.(Streptacidiphilus)9.链霉菌属(Streptomyces)10.(Streptoverticillium) 12.(Streptosporangineae)1.(Nocardiopsaceae)1.(Nocardiopsis)2.(Streptomonospora)3.(Thermobifida)2.(Streptosporangiaceae)1.(Acrocarpospora)2.(Herbidospora)3.(Microbispora)4.(Microtetraspora)5.(Nonomuraea)6.(Planobispora)7.(Planomonospora)8.(Planotetraspora)9.(Sphaerisporangium)10.(Streptosporangium)11.(Thermopolyspora)3.(Thermomonosporaceae)1.珊瑚状放线菌属(Actinocorallia)2.(Actinomadura)3.(Excellospora)4.(Spirillospora)5.(Thermomonospora)2.双歧杆菌目(Bifidobacteriales)1.双歧杆菌科(Bifidobacteriaceae)1.(Aeriscardovia)2.(Alloscardovia)3.双歧杆菌属(Bifidobacterium)4.(Gardnerella)5.(Metascardovia)6.(Parascardovia)7.(Scardovia)2.科未定3.(Coriobacteridae)1.(Coriobacteriales)1.(Coriobacterineae)1.(Coriobacteriaceae)1.奇异菌属(Atopobium)2.(Collinsella)3.(Coriobacterium)4.(Cryptobacterium)5.(Denitrobacterium)6.(Eggerthella)7.(Olsenella)8.(Slackia)4.红色杆菌亚纲(Rubrobacteridae)1.红色杆菌目(Rubrobacterales)1.红色杆菌亚目(Rubrobacterineae)1.(Conexibacteraceae)1.(Conexibacter)2.(Patulibacteraceae)1.(Patulibacter)3.红色杆菌科(Rubrobacteraceae)1.红色杆菌属(Rubrobacter)4.(Solirubrobacteraceae)1.(Solirubrobacter)5.(Thermoleophilaceae)1.(Thermoleophilum)5.球形杆菌亚纲(Sphaerobacteridae)1.球形杆菌目(Sphaerobacterales)1.球形杆菌亚目(Sphaerobacterineae)1.球形杆菌科(Sphaerobacteraceae)1.球形杆菌属(Sphaerobacter) 产水菌门(Aquificae)产水菌纲(Aquificae)1.产水菌目(Aquificales)1.产水菌科(Aquificaceae)1.产水菌属(Aquifex)2.(Calderobacterium)3.(Hydrogenivirga)4.(Hydrogenobacter)5.(Hydrogenobaculum)6.(Thermocrinis)2.除硫杆菌科(Desulfurobacteriaceae)1.(Balnearium)2.除硫杆菌属(Desulfurobacterium)3.热弧菌属(Thermovibrio)3.(Hydrogenothermaceae)1.(Hydrogenothermus)2.(Persephonella)3.(Sulfurihydrogenibium)拟杆菌门(Bacteroidetes)拟杆菌纲(Bacteroidetes)1.拟杆菌目(Bacteroidales)1.拟杆菌科(Bacteroidaceae)1.(Acetomicrobium)2.(Anaerophaga)3.(Anaerorhabdus)4.拟杆菌属(Bacteroides)5.(Pontibacter)2.紫单胞菌科(Porphyromonadaceae)1.(Barnesiella)2.(Capsularis)3.(Dysgonomonas)4.(Hallella)5.(Odoribacter)6.(Oribaculum)7.(Paludibacter)8.(Parabacteroides)9.紫单胞菌属(Porphyromonas) （多译作“卟啉单胞菌”，但porphyro-应来源于希腊语“紫色”）10.(Proteiniphilum)11.(Tannerella)12.(Xylanibacter)3.普雷沃氏菌科(Prevotellaceae)1.普雷沃氏菌属(Prevotella) （或译作“普氏菌”）4.理研菌科(Rikenellaceae)1.(Alistipes)2.(Alkaliflexus)3.(Marinilabilia)4.(Petrimonas)5.理研菌属(Rikenella) （注：Riken是日语“理化学研究所”简称）5.科未定1.(Acetofilamentum)2.(Acetothermus)黄杆菌纲(Flavobacteria)1.黄杆菌目(Flavobacteriales)1.蟑螂杆状体科(Blattabacteriaceae)1.蟑螂杆状体属(Blattabacterium)2.(Cryomorphaceae)1.(Algoriphagus)2.(Brumimicrobium)3.(Crocinitomix)4.(Cryomorpha)5.(Fluviicola)6.李时珍菌属(Lishizhenia)7.(Owenweeksia)3.黄杆菌科(Flavobacteriaceae)1.(Actibacter)2.(Aequorivita)3.(Algibacter)4.(Aquimarina)5.(Arenibacter)6.伯杰菌属(Bergeyella)7.(Bizionia)8.碳酸噬胞菌属(Capnocytophaga) （注：多译作“二氧化碳噬纤维菌属”）9.噬纤维素菌属(Cellulophaga)10.金黄杆菌属(Chryseobacterium)11.(Cloacibacterium)12.(Coenonia)13.(Costertonia)14.(Croceibacter)15.独岛菌属(Dokdonia)16.东海菌属(Donghaeana)17.(Elizabethkingia)18.(Empedobacter)19.(Epilithonimonas)20.(Flaviramulus)21.黄杆菌属(Flavobacterium)22.(Formosa)23.泥滩杆菌属(Gaetbulibacter)24.泥滩微菌属(Gaetbulimicrobium)25.(Galbibacter)26.(Gelidibacter)27.(Gillisia)28.(Gilvibacter)29.革兰菌属(Gramella)30.(Kaistella)31.(Kordia)32.(Krokinobacter)33.(Lacinutrix)34.列文虎克菌属(Leeuwenhoekiella)35.(Lutibacter)36.(Maribacter)37.(Mariniflexile)38.(Marixanthomonas)39.(Mesonia)40.(Muricauda)41.(Myroides)42.(Nonlabens)43.(Olleya)44.(Ornithobacterium)45.(Persicivirga)46.(Pibocella)47.极地杆菌属(Polaribacter)48.冷弯菌属(Psychroflexus)49.(Psychroserpens)50.(Riemerella)51.(Robiginitalea)52.(Salegentibacter)53.(Sandarakinotalea)54.(Sediminibacter)55.(Sediminicola)56.世宗菌属(Sejongia)57.(Stanierella)58.(Stenothermobacter)59.(Subsaxibacter)60.(Subsaximicrobium)61.(Tamlana)62.(Tenacibaculum)63.(Ulvibacter)64.(Vitellibacter)65.(Wautersiella)66.(Weeksella)67.(Winogradskyella)68.丽水菌属(Yeosuana)69.(Zeaxanthinibacter)70.周氏菌属(Zhouia)71.(Zobellia)72.王祖农菌属(Zunongwangia) 鞘脂杆菌纲(Sphingobacteria)1.鞘脂杆菌目(Sphingobacteriales)1.泉发菌科(Crenotrichaceae)1.(Balneola)2.(Chitinophaga)3.泉发菌属(Crenothrix)4.(Rhodothermus)5.(Salinibacter)6.(Terrimonas)7.(Toxothrix)2.(Flammeovirgaceae)1.(Flammeovirga)2.(Flexithrix)3.(Perexilibacter)4.(Persicobacter)5.(Rapidithrix)6.(Sediminitomix)7.(Thermonema)3.屈挠杆菌科(Flexibacteraceae)1.(Adhaeribacter)2.(Aquiflexum)3.(Arcicella)4.(Belliella)5.(Chimaereicella)6.(Cyclobacterium)7.噬胞菌属(Cytophaga) （注：目前多称此属为“噬纤维菌属”，此处依拉丁文）8.(Dyadobacter)9.(Echinicola)10.(Effluviibacter)11.(Emticicia)12.(Fabibacter)13.(Flectobacillus)14.屈挠杆菌属(Flexibacter)15.(Hongiella)16.(Hymenobacter)17.(Larkinella)18.(Leadbetterella)19.(Marinicola)20.(Meniscus)21.(Microscilla)22.(Niastella)23.(Persicitalea)24.(Reichenbachiella)25.(Rhodonellum)26.(Roseivirga)27.(Runella)28.(Spirosoma)29.生孢噬胞菌属(Sporocytophaga)4.腐螺旋菌科(Saprospiraceae)1.(Aureispira)2.(Haliscomenobacter)3.(Lewinella)4.腐螺旋菌属(Saprospira)5.鞘脂杆菌科(Sphingobacteriaceae)1.(Mucilaginibacter)2.(Olivibacter)3.(Parapedobacter)4.(Pedobacter)5.(Pseudosphingobacterium)6.鞘脂杆菌属(Sphingobacterium)6.科未定1.(Niabella)纲未定1.(Flavisolibacter)2.(Fulvivirga)3.(Prolixibacter)4.(Segetibacter)衣原体门(Chlamydiae)衣原体纲(Chlamydiae)1.衣原体目(Chlamydiales)1.衣原体科(Chlamydiaceae)1.衣原体属(Chlamydia)2.嗜衣体属(Chlamydophila)2.副衣原体属(Parachlamydiaceae)1.新衣原体属(Neochlamydia)2.副衣原体属(Parachlamydia)3.芯卡体科(Simkaniaceae)1.芯卡体属(Simkania) （注：人名缩写简称，此处用音译）2.棍衣原体属(Rhabdochlamydia)*4.华诊体科(Waddliaceae)1.华诊体属(Waddlia) （注：WADDL为“华盛顿动物病诊断实验室”缩写）绿菌门(Chlorobi)绿菌纲(Chlorobia)1.绿菌目(Chlorobiales)1.绿菌科(Chlorobiaceae)1.臂绿菌属(Ancalochloris)2.绿棒菌属(Chlorobaculum)3.绿菌属(Chlorobium)4.绿爬菌属(Chloroherpeton)5.暗网菌属(Pelodictyon)6.突柄绿菌属(Prosthecochloris)绿弯菌门(Chloroflexi)厌氧绳菌纲(Anaerolineae)1.厌氧绳菌目(Anaerolineales)1.厌氧绳菌科(Anaerolineaceae)1.厌氧绳菌属(Anaerolinea)2.(Bellilinea)3.纤绳菌属(Leptolinea)4.(Levilinea)5.长绳菌属(Longilinea)暖绳菌纲(Caldilineae)1.暖绳菌目(Caldilineales)1.暖绳菌科(Caldilineaceae)1.暖绳菌属(Caldilinea)绿弯菌纲(Chloroflexi)1.绿弯菌目(Chloroflexales)1.绿弯菌科(Chloroflexaceae)1.绿弯菌属(Chloroflexus)2.绿线菌属(Chloronema)3.太阳发菌属(Heliothrix)4.玫瑰弯菌属(Roseiflexus)2.颤绿菌科(Oscillochloridaceae)1.颤绿菌属(Oscillochloris)2.爬管菌目(Herpetosiphonales)1.爬管菌科(Herpetosiphonaceae)1.爬管菌属(Herpetosiphon) 产金菌门(Chrysiogenetes) 产金菌纲(Chrysiogenetes)1.产金菌目(Chrysiogenales)1.产金菌科(Chrysiogenaceae)1.产金菌属(Chrysiogenes)蓝藻门(Cyanobacteria)蓝藻纲(Cyanobacteria)1.第一目（色球藻目(Chroococcales)）@1.第一科@1.管孢藻属(Chamaesiphon)@2.色球藻属(Chroococcus)@3.(Cyanobacterium)@4.(Cyanobium)@5.(Cyanothece)@6.蓝纤维藻属(Dactylococcopsis)@7.(Gloeobacter)@8.黏球藻属(Gloeocapsa)@9.黏杆藻属(Gloeothece)@10.微囊藻属(Microcystis)@11.原绿球藻属(Prochlorococcus)@12.原绿藻属(Prochloron)@13.聚球藻属(Synechococcus)@14.集胞藻属(Synechocystis)@2.第二目（宽球藻目(Pleurocapsales)）@1.第一科@1.(Cyanocystis)@2.(Dermocarpella)@3.(Stanieria)@4.异球藻属(Xenococcus)@2.第二科@1.拟色球藻属(Chroococcidiopsis)@2.黏囊藻属(Myxosarcina)@3.宽球藻属(Pleurocapsa)@3.第三目（颤藻目(Oscillatoriales)）@1.第一科@1.节螺藻属(Arthrospira)@ （包含商业化螺旋藻）2.(Borzia)@3.(Crinalium)@4.(Geitlerinema)@5.盐螺旋藻属(Halospirulina)6.(Leptolyngbya)@7.(Limnothrix)@8.鞘丝藻属(Lyngbya)@9.微鞘藻属(Microcoleus)@10.颤藻属(Oscillatoria)@11.(Planktothrix)@12.原绿发藻属(Prochlorothrix)@13.(Pseudanabaena)@14.螺旋藻属(Spirulina)@15.(Starria)@16.束藻属(Symploca)@17.束毛藻属(Trichodesmium)18.(Tychonema)@4.第四目（念珠藻目(Nostocales)）@1.第一科@1.鱼腥藻属(Anabaena)@2.项圈藻属(Anabaenopsis)@3.束丝藻属(Aphanizomenon)@4.(Cyanospira)@5.(Cylindrospermopsis)@6.筒孢藻属(Cylindrospermum)@7.节球藻属(Nodularia)@8.念珠藻属(Nostoc)@9.伪枝藻属(Scytonema)@2.第二科@1.眉藻属(Calothrix)@2.胶须藻属(Rivularia)@3.单歧藻属(Tolypothrix)@5.第五目（真枝藻目(Stigonematales)）@1.第一科@1.(Chlorogloeopsis)@2.费氏藻属(Fischerella)@3.(Geitleria)@4.(Iyengariella)@5.拟念珠藻属(Nostochopsis)@6.真枝藻属(Stigonema)@脱铁杆菌门(Deferribacteres) 脱铁杆菌纲(Deferribacteres)1.脱铁杆菌目(Deferribacterales)1.脱铁杆菌科(Deferribacteraceae)1.脱铁杆菌属(Deferribacter)2.(Denitrovibrio)3.(Flexistipes)4.地弧菌属(Geovibrio)5.(Mucispirillum)2.科未定1.暖发菌属(Caldithrix)2.(Synergistes)异常球菌-栖热菌门(Deinococcus-Thermus)异常球菌纲(Deinococci)1.异常球菌目(Deinococcales)1.异常球菌科(Deinococcaceae)1.异常杆菌属(Deinobacter)2.异常球菌属(Deinococcus)2.特吕珀菌科(Trueperaceae)1.特吕珀菌属(Truepera)2.栖热菌目(Thermales)1.栖热菌科(Thermaceae)1.海栖热菌属(Marinithermus)2.亚栖热菌属(Meiothermus)3.海洋栖热菌属(Oceanithermus)4.栖热菌属(Thermus)5.火山栖热菌属(Vulcanithermus)网团菌门(Dictyoglomi)网团菌纲(Dictyoglomi)1.网团菌目(Dictyoglomales)1.网团菌科(Dictyoglomaceae)1.网团菌属(Dictyoglomus)纤维杆菌门(Fibrobacteres)纤维杆菌纲(Fibrobacteres)1.纤维杆菌目(Fibrobacterales)1.纤维杆菌科(Fibrobacteraceae)1.纤维杆菌属(Fibrobacter)厚壁菌门(Firmicutes)（低G+C革兰氏阳性菌）芽孢杆菌纲(Bacilli)1.芽孢杆菌目(Bacillales)1.(Alicyclobacillaceae)1.(Alicyclobacillus)2.(Pasteuria)3.(Sulfobacillus)2.芽孢杆菌科(Bacillaceae)1.(Alkalibacillus)2.(Amphibacillus)3.(Anoxybacillus)4.芽孢杆菌属(Bacillus)5.(Caldalkalibacillus)6.(Cerasibacillus)7.(Exiguobacterium)8.(Filobacillus)9.(Geobacillus)10.(Gracilibacillus)11.(Halalkalibacillus)12.(Halobacillus)13.(Haloactibacillus)14.(Jeotgalibacillus)15.(Lentibacillus)16.(Lysinibacillus)17.(Marinibacillus)18.(Oceanobacillus)19.(Ornithinibacillus)20.(Paraliobacillus)21.(Paucisalibacillus)22.(Pelagibacillus)23.(Piscibacillus)24.(Pontibacillus)25.糖球菌属(Saccharococcus)26.(Salibacillus)27.(Salimicrobium)28.(Salinibacillus)29.(Salirhabdus)30.(Sasuginibacillus)31.(Tenuibacillus)32.(Terribacillus)33.(Thalassobacillus)34.(Ureibacillus)35.(Virgibacillus)36.(Vulcanibacillus)3.(Caryophanaceae)1.(Caryophanon)4.李斯特氏菌科(Listeriaceae)1.环丝菌属(Brochothrix)2.李斯特氏菌属(Listeria)5.(Paenibacillaceae)1.(Ammoniphilus)2.(Aneurinibacillus)3.(Brevibacillus)4.(Cohnella)5.(Oxalophagus)6.(Paenibacillus)7.(Thermicanus)8.(Thermobacillus)6.(Planococcaceae)1.(Filibacter)2.(Kurthia)3.(Planococcus)4.(Planomicrobium)5.(Sporosarcina)7.芽孢乳杆菌科(Sporolactobacillaceae)1.(Marinococcus)2.(Sinococcus)3.芽孢乳杆菌属(Sporolactobacillus)4.(Tuberibacillus)8.葡萄球菌科(Staphylococcaceae)1.孪生菌属(Gemella)2.(Joetgalicoccus)3.(Macrococcus)4.(Salinicoccus)5.葡萄球菌属(Staphylococcus)9.(Thermoactinomycetaceae)1.(Laceyella)2.(Mechercharimyces)3.(Planifilum)4.(Seinonella)5.(Shimazuella)6.(Thermoactinomyces)7.(Thermoflavimicrobium)10.(Turicibacteraceae)1.(Turicibacter)11.科未定1.(Pullulanibacillus)2.乳杆菌目(Lactobacillales)1.气球菌科(Aerococcaceae)1.(Abiotrophia)2.气球菌属(Aerococcus)3.(Dolosicoccus)4.(Eremococcus)5.(Facklamia)6.(Globicatella)7.(Ignavigranum)2.肉杆菌科(Carnobacteriaceae)1.(Agitococcus)2.(Alkalibacterium)3.(Allofustis)4.(Alloiococcus)5.(Atopococcus)6.(Atopostipes)7.肉杆菌属(Carnobacterium)8.德库菌属(Desemzia) （DSMZ，德国微生物与细胞保藏中心）9.(Dolosigranulum)10.(Granulicatella)11.(Isobaculum)12.(Lactosphaera)13.(Marinilactibacillus)14.(Trichococcus)3.肠球菌科(Enterococcaceae)1.(Atopobacter)2.(Catellicoccus)3.肠球菌属(Enterococcus)4.(Melissococcus)5.(Pilibacter)6.(Tetragenococcus)7.漫游球菌属(Vagococcus)4.乳杆菌科(Lactobacillaceae)1.乳杆菌属(Lactobacillus)2.(Paralactobacillus)3.片球菌属(Pediococcus)5.明串珠菌科(Leuconostocaceae)1.明串珠菌属(Leuconostoc)2.(Oenococcus)3.(Weissella)6.颤螺旋菌科(Oscillospiraceae)1.颤杆菌克(Oscillibacter)2.颤螺旋菌属(Oscillospira)7.链球菌科(Streptococcaceae)1.乳球菌属(Lactococcus)2.(Lactovum)3.链球菌属(Streptococcus)8.科未定1.(Acetoanaerobium)2.互营球菌属(Syntrophococcus) 梭菌纲(Clostridia)1.梭菌目(Clostridiales)1.梭菌科(Clostridiaceae)1.(Acetanaerobacterium)2.(Acetivibrio)3.(Acidaminobacter)4.(Alkaliphilus)5.(Anaerobacter)6.(Anaerotruncus)7.(Anoxynatronum)8.(Bryantella)9.(Caloramator)10.(Caloranaerobacter)11.(Caminicella)12.(Clostridiisalibacter)13.梭菌属(Clostridium)14.(Coprobacillus)15.(Dorea)16.(Ethanoligenens)17.(Faecalibacterium)18.(Fastidiosipila)19.(Garciella)20.(Gracilibacter)21.(Guggenheimella)22.(Hespellia)23.(Natronincola)24.(Oxobacter)25.(Parasporobacterium)26.八叠球菌属(Sarcina)27.(Soehngenia)28.(Sporacetigenium)29.(Sporobacter)30.(Subdoligranulum)31.(Tepidibacter)32.(Tepidimicrobium)33.(Thermobrachium)34.(Thermohalobacter)35.(Tindallia)2.优杆菌科(Eubacteriaceae)1.醋杆菌属(Acetobacterium)2.(Alkalibacter)3.(Anaerofustis)4.(Anaerovorax)5.优杆菌属(Eubacterium)6.(Mogibacterium)7.(Pseudoramibacter)3.太阳杆菌科(Heliobacteriaceae)1.太阳杆状菌属(Heliobacillus)2.太阳杆菌属(Heliobacterium)3.嗜日菌属(Heliophilum)4.(Heliorestis)4.毛螺旋菌科(Lachnospiraceae)1.(Acetitomaculum)2.(Anaerofilum)3.(Anaerostipes)4.丁酸弧菌属(Butyrivibrio)5.(Catenibacterium)6.(Catonella)7.粪球菌属(Coprococcus)8.(Johnsonella)9.(Lachnobacterium)10.毛螺旋菌属(Lachnospira)11.(Moryella)12.(Oribacterium)13.假丁酸弧菌属(Pseudobutyrivibrio)14.(Roseburia)15.瘤胃球菌属(Ruminococcus)16.(Shuttleworthia)17.(Sporobacterium)5.消化球菌科(Peptococcaceae)1.(Carboxydothermus)2.(Cryptanaerobacter)3.(Dehalobacter)4.(Desulfitobacterium)5.(Desulfonispora)6.(Desulfosporosinus)7.(Desulfotomaculum)8.(Pelotomaculum)9.消化球菌属(Peptococcus)10.(Syntrophobotulus)11.(Thermincola)12.(Thermoterrabacterium)6.消化链球菌科(Peptostreptococcaceae)1.(Anaerococcus)2.(Filifactor)3.(Finegoldia)4.(Fusibacter)5.(Gallicola)6.(Helcococcus)7.微单胞菌属(Parvimonas) （原名Micromonas）8.(Peptoniphilus)9.消化链球菌属(Peptostreptococcus)10.(Sedimentibacter)11.(Sporanaerobacter)12.(Tissierella)7.互营单胞菌科(Syntrophomonadaceae)1.(Aminiphilus)2.(Aminobacterium)3.(Aminomonas)4.(Anaerobaculum)5.(Anaerobranca)6.(Caldicellulosiruptor)7.(Carboxydocella)8.(Dethiosulfovibrio)9.(Pelospora)10.互营单胞菌属(Syntrophomonas)11.(Syntrophospora)12.互营热菌属(Syntrophothermus)13.(Thermaerobacter)14.(Thermanaerovibrio)15.(Thermohydrogenium)16.(Thermosyntropha)17.(Thermovirga)8.韦荣氏菌科(Veillonellaceae)1.(Acetonema)2.氨基酸球菌属(Acidaminococcus)3.(Allisonella)4.(Anaeroarcus)5.(Anaeroglobus)6.(Anaeromusa)7.(Anaerosinus)8.(Anaerovibrio)9.(Centipeda)10.(Dendrosporobacter)11.(Dialister)12.(Megamonas)13.(Megasphaera)14.光冈菌属(Mitsuokella)15.(Papillibacter)16.(Pectinatus)17.(Pelosinus)18.(Phascolarctobacterium)19.(Propionispira)20.(Propionispora)21.(Quinella)22.(Schwartzia)23.新月形单胞菌属(Selenomonas)24.鼠孢菌属(Sporomusa)25.(Sporotalea)26.(Succiniclasticum)27.(Succinispira)28.(Thermosinus)29.韦荣氏菌属(Veillonella)30.(Zymophilus)9.科未定1.(Anaerovirgula)2.(Dethiosulfatibacter)3.(Geosporobacter)4.(Howardella)5.(Proteiniborus)2.盐厌氧菌目(Halanaerobiales)1.盐厌氧菌科(Halanaerobiaceae)1.盐厌氧菌属(Halanaerobium)2.(Halocella)3.(Haloincola)4.(Halothermothrix)2.盐拟杆菌科(Halobacteroidaceae)1.(Acetohalobium)2.(Halanaerobacter)3.盐拟杆菌属(Halobacteroides)4.(Halonatronum)5.(Natroniella)6.(Orenia)7.(Selenihalanaerobacter)8.(Sporohalobacter)3.盐碱厌氧菌目(Natranaerobiales)1.盐碱厌氧菌科(Natranaerobiaceae)1.盐碱厌氧菌属(Natranaerobius)4.热厌氧杆菌目(Thermoanaerobacteriales)1.热厌氧杆菌科(Thermoanaerobacteriaceae)1.(Acetogenium)2.(Ammonifex)3.(Caldanaerobacter)4.(Carboxydibrachium)5.(Coprothermobacter)6.(Desulfovirgula)7.(Gelria)8.(Mahella)9.(Moorella)10.(Sporotomaculum)11.(Tepidanaerobacter)12.(Thermacetogenium)13.热厌氧单胞菌属(Thermanaeromonas)14.(Thermoanaerobacter)15.(Thermoanaerobium)16.(Thermoanaerobacterium)17.热厌氧菌属(Thermoanaerobium)18.(Thermobacteroides)19.(Thermosediminibacter)20.(Thermovenabulum)2.热脱硫菌科(Thermodesulfobiaceae)1.热脱硫菌属(Thermodesulfobium) 5.目未定1.(Desulfitibacter)2.(Symbiobacterium)热石杆菌纲(Thermolithobacteria)1.热石杆菌目(Thermolithobacterales)1.热石杆菌科(Thermolithobacteraceae)1.热石杆菌属(Thermolithobacter) 梭杆菌门(Fusobacteria)梭杆菌纲(Fusobacteria)1.梭杆菌目(Fusobacteriales)1.梭杆菌科(Fusobacteriaceae)1.梭杆菌属(Fusobacterium)2.(Ilyobacter)3.纤毛菌属(Leptotrichia)4.(Propionigenium)5.(Sebaldella)6.(Sneathia)7.(Streptobacillus)2.科未定1.(Cetobacterium)芽单胞菌门(Gemmatimonadetes)芽单胞菌纲(Gemmatimonadetes)1.芽单胞菌目(Gemmatimonadales)1.芽单胞菌科(Gemmatimonadaceae)1.芽单胞菌属(Gemmatimonas)黏胶球形菌门(Lentisphaerae)黏胶球形菌纲(Lentisphaerae)1.黏胶球形菌目(Lentisphaerales)1.黏胶球形菌科(Lentisphaeraceae)1.黏胶球形菌属(Lentisphaera)2.食物谷菌目(Victivallales)1.食物谷菌科(Victivallaceae)1.食物谷菌属(Victivallis)硝化螺旋菌门(Nitrospirae)硝化螺旋菌纲(Nitrospira)1.硝化螺旋菌目(Nitrospirales)1.硝化螺旋菌科(Nitrospiraceae)1.钩端螺菌属(Leptospirillum)2.硝化螺旋菌属(Nitrospira)3.磁杆菌属(Magnetobacterium)*4.热脱硫弧菌属(Thermodesulfovibrio) 浮霉菌门(Planctomycetes)浮霉菌纲(Planctomycetacia)1.浮霉菌目(Planctomycetales)1.浮霉菌科(Planctomycetaceae)1.(Blastopirellula)2.(Gemmata)3.(Isosphaera)4.小梨形菌属(Pirellula)5.浮霉菌属(Planctomycetes)6.红小梨形菌属(Rhodopirellula)7.(Schlesneria)2.科未定（均未能分离培养，见厌氧氨氧化菌）1.(Brocadia)*2.(Kuenenia)*3.(Scalindua)*海绵杆菌门(Poribacteria)*变形菌门(Proteobacteria)α-变形菌纲(Alphaproteobacteria)1.柄杆菌目(Caulobacterales)1.柄杆菌科(Caulobacteraceae)1.(Asticcacaulis)2.短波单胞菌属(Brevundimonas)3.柄杆菌属(Caulobacter)4.苯基杆菌属(Phenylobacterium)2.(Kordiimonadales)1.(Kordiimonadaceae)1.(Kordiimonas)3.短小盒菌目(Parvularculales)1.短小盒菌科(Parvularculaceae)1.短小盒菌属(Parvularcula)4.根瘤菌目(Rhizobiales)1.橙单胞菌科(Aurantimonadaceae)1.橙单胞菌属(Aurantimonas)2.(Fulvimarina)3.(Martelella)2.巴通体科(Bartonellaceae)1.巴通体属(Bartonella)3.(Rochalimaea)3.拜叶林克氏菌科(Beijerinckiaceae)1.拜叶林克氏菌属(Beijerinckia)2.(Chelatococcus)3.(Methylocapsa)4.(Methylocella)4.慢生根瘤菌科(Bradyrhizobiaceae)1.阿菲波菌属(Afipia)2.农单胞菌属(Agromonas)3.(Balneimonas)4.芽生杆菌属(Blastobacter)5.(Bosea)6.慢生根瘤菌属(Bradyrhizobium)7.硝化杆菌属(Nitrobacter)8.(Oligotropha)9.(Rhodoblastus)10.红假单胞菌属(Rhodopseudomonas) 5.布鲁氏菌科(Brucellaceae)1.布鲁氏菌属(Brucella)2.(Crabtreella)3.(Daeguia)4.支动菌属(Mycoplana)5.苍白杆菌属(Ochrobactrum)6.(Pseudochrobactrum)6.黏着杆菌科(Cohaesibacteraceae)1.黏着杆菌属(Cohaesibacter)7.生丝微菌科(Hyphomicrobiaceae)1.(Ancalomicrobium)2.(Angulomicrobium)3.水杆菌属(Aquabacter)4.芽绿菌属(Blastochloris)5.(Devosia)6.(Dichotomicrobium)7.(Filomicrobium)8.(Gemmiger)9.生丝微菌属(Hyphomicrobium)10.(Methylorhabdus)11.土微菌属(Pedomicrobium)12.突柄微菌属(Prosthecomicrobium)13.红微菌属(Rhodomicrobium)14.(Rhodoplanes)15.(Seliberia)8.甲基杆菌科(Methylobacteriaceae)。

细菌分类表酸杆菌门(Acidobacteria) [编辑] 酸杆菌纲(Acidobacteria) 1. 酸杆菌目(Acidobacteriales)1. 酸杆菌科(Acidobacteriaceae)1. 酸杆菌属(Acidobacterium)2. (Edaphobacter)3. (Terriglobus)[编辑] 全噬菌纲(Holophagae) 1. 石鳖杆菌目(Acanthopleuribacterales)1. 石鳖杆菌科(Acanthopleuribacteraceae)1. 石鳖杆菌属(Acanthopleuribacter)2. 全噬菌目(Holophagales)1. 全噬菌科(Holophagaceae)1. 地发菌属(Geothrix)2. 全噬菌属(Holophaga)[编辑] 放线菌门(Actinobacteria)（高G+C革兰氏阳性菌） [编辑] 放线菌纲(Actinobacteria) 1. 酸微菌亚纲(Acidimicrobidae)1. 酸微菌目(Acidimicrobiales)1. 酸微菌亚目(Acidimicrobineae)1. 酸微菌科(Acidimicrobiaceae)1. 酸微菌属(Acidimicrobium)2. (Iamiaceae)1. (Iamia)2. 放线菌亚纲(Actinobacteridae)1. 放线菌目(Actinomycetales)1. 放线菌亚目(Actinomycineae)1. 放线菌科(Actinomycetaceae)1. 放线棒菌属(Actinobaculum)2. 放线菌属(Actinomyces)3. 隐秘杆菌属(Arcanobacterium)2.3.4.5.4. (Falcivibrio)5. 动弯杆菌属(Mobiluncus)6. (Varibaculum)(Actinopolysporineae)1. (Actinopolysporaceae)1. (Actinopolyspora)(Catenulisporineae)1. (Actinospicaceae)1. (Actinospica)2. (Catenulisporaceae)1. (Catenulispora)棒杆菌亚目(Corynebacterineae)1. 棒杆菌科(Corynebacteriaceae)1. (Bacterionema)2. (Caseobacter)3. 棒杆菌属(Corynebacterium)4. (Turicella)2. 迪茨氏菌科(Dietziaceae)1. 迪茨氏菌属(Dietzia)3. 分枝杆菌科(Mycobacteriaceae)1. 分枝杆菌属(Mycobacterium) （含结核杆菌）4. 诺卡氏菌科(Nocardiaceae)1. 戈登氏菌属(Gordonia)2. (Micropolyspora)3. (Millisia)4. 诺卡氏菌属(Nocardia)5. 红球菌属(Rhodococcus)6. 斯科曼氏菌属(Skermania)7. (Williamsia)8. (Smaragdicoccus)5. (Segniliparaceae)1. (Segniliparus)6. 束村氏菌科(Tsukamurellaceae)1. 束村氏菌属(Tsukamurella)弗兰克氏菌亚目(Frankineae)1. 酸热菌科(Acidothermaceae)1. 酸热菌属(Acidothermus)2. 弗兰克氏菌科(Frankiaceae)1. 弗兰克氏菌属(Frankia)3. 地嗜皮菌科(Geodermatophilaceae)1. 芽球菌属(Blastococcus)2. 地嗜皮菌属(Geodermatophilus)3. (Modestobacter)4. (Kineosporiaceae)1. (Cryptosporangium)2. (Kineococcus)3. (Kineosporia)5. (Nakamurellaceae)1. (Humicoccus)2. (Nakamurella)3. (Quadrisphaera)6. 孢鱼菌科(Sporichthyaceae)1. 孢鱼菌属(Sporichthya)6. 糖霉菌亚目(Glycomycineae)1. 糖霉菌科(Glycomycetaceae)1. 糖霉菌属(Glycomyces)2. (Stackerbrandtia)7. 微球菌亚目(Micrococcineae)1. 获山氏菌科(Beutenbergiaceae)1. 获山氏菌属(Beutenbergia)2. 乔治菌属(Georgenia)3. 萨勒河菌属(Salana)2. 博戈里亚湖菌科(Bogoriellaceae)1. 博戈里亚湖菌属(Bogoriella)3. 短杆菌科(Brevibacteriaceae)1. 短杆菌属(Brevibacterium)4. 纤维素单胞菌科(Cellulomonadaceae)1. 纤维素单胞菌属(Cellulomonas)2. 厄氏菌属(Oerskovia)3. (Tropheryma)5. (Dermabacteraceae)1. (Brachybacterium)2. (Dermabacter)6. (Dermacoccaceae)1. (Demetria)2. (Dermacoccus)3. (Kytococcus)7. (Dermatophilaceae)1. (Dermatophilus)2. (Kineosphaera)8. (Intrasporangiaceae)1. (Arsenicicoccus)2. (Humihabitans)3. (Intrasporangium)4. (Janibacter)5. (Knoellia)6. (Kribbia)7. (Lapillicoccus)8. (Ornithinicoccus) 9. (Ornithinimicrobium) 10. (Oryzihumus) 11. (Serinicoccus) 12. (Terrabacter) 13. (Terracoccus) 14. (Tetrasphaera)9. (Jonesiaceae)1. (Jonesia)10. (Microbacteriaceae)1. (Agreia)2. (Agrococcus)3. (Agromyces)4. (Aureobacterium)5. (Clavibacter)6. (Cryobacterium)7. (Curtobacterium)8. (Frigoribacterium)9. (Frondicola) 10. (Gulosibacter) 11. (Labedella) 12.(Leifsonia) 13. (Leucobacter) 14. (Microbacterium) 15. (Microcella) 16. (Mycetocola) 17. (Okibacterium) 18. (Plantibacter)19. (Pseudoclavibacter) 20. (Rathayibacter) 21. (Rhodoglobus) 22. (Salinibacterium) 23. (Subtercola) 24. (Yonghaparkia) 25. (Zimmermannella)11. 微球菌科(Micrococcaceae)1. (Acaricomes)2. 节杆菌属(Arthrobacter)3. (Citricoccus)4. (Kocuria)5. 微球菌属(Micrococcus)6. (Nesterenkonia)7. (Renibacterium)8. 罗氏菌属(Rothia)9. 口腔球菌属(Stomatococcus) 10. 刘志恒菌属(Zhihengliuella)12. (Promicromonosporaceae)1. (Cellulosimicrobium)2. (Isoptericola)3. (Myceligenerans)4. (Promicromonospora)5. (Xylanibacterium)6. (Xylanimonas)13. (Rarobacteraceae)1. (Rarobacter)14. (Sanguibacteraceae)1. 血杆菌属(Sanguibacter)15. (Yaniaceae)1. (Yania)16. 科未定1. (Actinotalea)2. (Demequina)3. (Phycicoccus)4. (Ruania)8. 微单孢菌亚目(Micromonosporineae)1. 微单孢菌科(Micromonosporaceae)1. (Actinocatenispora)2. (Actinoplanes)3. (Amorphosporangium)4. (Ampullariella)5. (Asanoa)6. (Catellatospora)7. (Catenuloplanes)8. (Couchiolanes)9. (Dactylosporangium) 10. (Krasilnikovia) 11. (Longispora) 12. (Luedemannella)13. 微单孢菌属(Micromonospora) 14. (Pilimelia)15. (Planopolyspora) 16. (Polymorphospora) 17. (Salinispora) 18. (Spirilliplanes) 19. (Verrucosispora) 20. (Virgisporangium)9. 丙酸杆菌亚目(Propionibacterineae)1. (Nocardioidaceae)感谢您的阅读，祝您生活愉快。

细菌分类表细菌分类表1 酸杆菌门(Acidobacteria)o 1.1 酸杆菌纲(Acidobacteria)o 1.2 全噬菌纲(Holophagae)2 放线菌门(Actinobacteria)（高G+C革兰氏阳性菌）o 2.1 放线菌纲(Actinobacteria)3 产水菌门(Aquificae)o 3.1 产水菌纲(Aquificae)4 拟杆菌门(Bacteroidetes)o 4.1 拟杆菌纲(Bacteroidetes)o 4.2 黄杆菌纲(Flavobacteria)o 4.3 鞘脂杆菌纲(Sphingobacteria)o 4.4 纲未定5 衣原体门(Chlamydiae)o 5.1 衣原体纲(Chlamydiae)6 绿菌门(Chlorobi)o 6.1 绿菌纲(Chlorobia)7 绿弯菌门(Chloroflexi)o7.1 厌氧绳菌纲(Anaerolineae)o7.2 暖绳菌纲(Caldilineae)o7.3 绿弯菌纲(Chloroflexi)8 产金菌门(Chrysiogenetes)o8.1 产金菌纲(Chrysiogenetes)9 蓝藻门(Cyanobacteria)o9.1 蓝藻纲(Cyanobacteria)10 脱铁杆菌门(Deferribacteres)o10.1 脱铁杆菌纲(Deferribacteres)11 异常球菌-栖热菌门(Deinococcus-Thermus)o11.1 异常球菌纲(Deinococci)12 网团菌门(Dictyoglomi)o12.1 网团菌纲(Dictyoglomi)13 纤维杆菌门(Fibrobacteres)o13.1 纤维杆菌纲(Fibrobacteres)14 厚壁菌门(Firmicutes)（低G+C革兰氏阳性菌）o14.1 芽孢杆菌纲(Bacilli)o14.2 梭菌纲(Clostridia)o14.3 热石杆菌纲(Thermolithobacteria) ?15 梭杆菌门(Fusobacteria)o15.1 梭杆菌纲(Fusobacteria)16 芽单胞菌门(Gemmatimonadetes)o16.1 芽单胞菌纲(Gemmatimonadetes) ?17 黏胶球形菌门(Lentisphaerae)o17.1 黏胶球形菌纲(Lentisphaerae)18 硝化螺旋菌门(Nitrospirae)o18.1 硝化螺旋菌纲(Nitrospira)19 浮霉菌门(Planctomycetes)o19.1 浮霉菌纲(Planctomycetacia)20 海绵杆菌门(Poribacteria)21 变形菌门(Proteobacteria)o21.1 α-变形菌纲(Alphaproteobacteria)o21.2 β-变形菌纲(Betaproteobacteria)o21.3 δ-变形菌纲(Deltaproteobacteria)o21.4 ε-变形菌纲(Epsilonproteobacteria)o21.5 γ-变形菌纲(Gammaproteobacteria)22 螺旋体门(Spirochaetes)o22.1 螺旋体纲(Spirochaetes)23 柔膜菌门(Tenericutes)o23.1 柔膜菌纲(Mollicutes)24 热脱硫杆菌门(Thermodesulfobacteria)o24.1 热脱硫杆菌纲(Thermodesulfobacteria) ?25 热微菌门(Thermomicrobia)o25.1 热微菌纲(Thermomicrobia)26 热袍菌门(Thermotogae)o26.1 热袍菌纲(Thermotogae)27 疣微菌门(Verrucomicrobia)o27.1 丰祐菌纲(Opitutae)o27.2 疣微菌纲(Verrucomicrobiae)28 门未定o纤线杆菌纲(Ktedonobacteria)o纲未定1.酸杆菌门(Acidobacteria)1.1 酸杆菌纲(Acidobacteria)1.酸杆菌目(Acidobacteriales)1.酸杆菌科(Acidobacteriaceae)1.酸杆菌属(Acidobacterium)2.(Edaphobacter)3.(Terriglobus)1.2 全噬菌纲(Holophagae)1.石鳖杆菌目(Acanthopleuribacterales)1.石鳖杆菌科(Acanthopleuribacteraceae)1.石鳖杆菌属(Acanthopleuribacter)2.全噬菌目(Holophagales)1.全噬菌科(Holophagaceae)1.地发菌属(Geothrix)2.全噬菌属(Holophaga)2.放线菌门(Actinobacteria)（高G+C革兰氏阳性菌）2.1 放线菌纲(Actinobacteria)1.酸微菌亚纲(Acidimicrobidae)1.酸微菌目(Acidimicrobiales) 1.酸微菌亚目(Acidimicrobineae) 1.酸微菌科(Acidimicrobiaceae)1.酸微菌属(Acidimicrobium)2.(Iamiaceae)1.(Iamia)2.放线菌亚纲(Actinobacteridae) 1.放线菌目(Actinomycetales) 1.放线菌亚目(Actinomycineae) 1.放线菌科(Actinomycetaceae)1.放线棒菌属(Actinobaculum)2.放线菌属(Actinomyces)3.隐秘杆菌属(Arcanobacterium)4.(Falcivibrio)5.动弯杆菌属(Mobiluncus)6.(Varibaculum)2.(Actinopolysporineae)1.(Actinopolysporaceae)1.(Actinopolyspora)3.(Catenulisporineae)1.(Actinospicaceae)1.(Actinospica)2.(Catenulisporaceae)1.(Catenulispora)4.棒杆菌亚目(Corynebacterineae) 1.棒杆菌科(Corynebacteriaceae)1.(Bacterionema)2.(Caseobacter)3.棒杆菌属(Corynebacterium)4.(Turicella)2.迪茨氏菌科(Dietziaceae)1.迪茨氏菌属(Dietzia)3.分枝杆菌科(Mycobacteriaceae) 1.分枝杆菌属(Mycobacterium)4.诺卡氏菌科(Nocardiaceae)1.戈登氏菌属(Gordonia)2.(Micropolyspora)3.(Millisia)4.诺卡氏菌属(Nocardia)5.红球菌属(Rhodococcus)6.斯科曼氏菌属(Skermania)7.(Williamsia)8.(Smaragdicoccus)5.(Segniliparaceae)1.(Segniliparus)6.束村氏菌科(Tsukamurellaceae) 1.束村氏菌属(Tsukamurella)5.弗兰克氏菌亚目(Frankineae)1.酸热菌科(Acidothermaceae)1.酸热菌属(Acidothermus)2.弗兰克氏菌科(Frankiaceae)1.弗兰克氏菌属(Frankia)3.地嗜皮菌科(Geodermatophilaceae)1.芽球菌属(Blastococcus)2.地嗜皮菌属(Geodermatophilus)3.(Modestobacter)4.(Kineosporiaceae)1.(Cryptosporangium)2.(Kineococcus)3.(Kineosporia)5.(Nakamurellaceae)1.(Humicoccus)2.(Nakamurella)3.(Quadrisphaera)6.孢鱼菌科(Sporichthyaceae)1.孢鱼菌属(Sporichthya)6.糖霉菌亚目(Glycomycineae)1.糖霉菌科(Glycomycetaceae)1.糖霉菌属(Glycomyces)2.(Stackerbrandtia)7.微球菌亚目(Micrococcineae)1.获山氏菌科(Beutenbergiaceae)1.获山氏菌属(Beutenbergia)2.乔治菌属(Georgenia)3.萨勒河菌属(Salana)2.博戈里亚湖菌科(Bogoriellaceae)1.博戈里亚湖菌属(Bogoriella)3.短杆菌科(Brevibacteriaceae)1.短杆菌属(Brevibacterium)4.纤维素单胞菌科(Cellulomonadaceae)1.纤维素单胞菌属(Cellulomonas)2.厄氏菌属(Oerskovia)3.(Tropheryma)5.(Dermabacteraceae)1.(Brachybacterium)2.(Dermabacter)6.(Dermacoccaceae)1.(Demetria)2.(Dermacoccus)3.(Kytococcus)7.(Dermatophilaceae)1.(Dermatophilus)2.(Kineosphaera)8.(Intrasporangiaceae)1.(Arsenicicoccus)2.(Humihabitans)3.(Intrasporangium)4.(Janibacter)5.(Knoellia)6.(Kribbia)7.(Lapillicoccus)8.(Ornithinicoccus)9.(Ornithinimicrobium)10.(Oryzihumus)11.(Serinicoccus)12.(Terrabacter)13.(Terracoccus)14.(Tetrasphaera)9.(Jonesiaceae)1.(Jonesia)10.(Microbacteriaceae)1.(Agreia)2.(Agrococcus)3.(Agromyces)4.(Aureobacterium)5.(Clavibacter)6.(Cryobacterium)7.(Curtobacterium)8.(Frigoribacterium)9.(Frondicola)10.(Gulosibacter)11.(Labedella)12.(Leifsonia)13.(Leucobacter)14.(Microbacterium)15.(Microcella)16.(Mycetocola)17.(Okibacterium)18.(Plantibacter)19.(Pseudoclavibacter)20.(Rathayibacter)21.(Rhodoglobus)22.(Salinibacterium)23.(Subtercola)24.(Yonghaparkia)25.(Zimmermannella)11.微球菌科(Micrococcaceae)1.(Acaricomes)2.节杆菌属(Arthrobacter)3.(Citricoccus)4.(Kocuria)5.微球菌属(Micrococcus)6.(Nesterenkonia)7.(Renibacterium)8.罗氏菌属(Rothia)9.口腔球菌属(Stomatococcus)10.刘志恒菌属(Zhihengliuella) 12.(Promicromonosporaceae)1.(Cellulosimicrobium)2.(Isoptericola)3.(Myceligenerans)4.(Promicromonospora)5.(Xylanibacterium)6.(Xylanimonas)13.(Rarobacteraceae)1.(Rarobacter)14.(Sanguibacteraceae)1.血杆菌属(Sanguibacter)15.(Yaniaceae)1.(Yania)16.科未定1.(Actinotalea)2.(Demequina)3.(Phycicoccus)4.(Ruania)8.微单孢菌亚目(Micromonosporineae) 1.微单孢菌科(Micromonosporaceae)1.(Actinocatenispora)2.(Actinoplanes)3.(Amorphosporangium)4.(Ampullariella)5.(Asanoa)6.(Catellatospora)7.(Catenuloplanes)8.(Couchiolanes)9.(Dactylosporangium)10.(Krasilnikovia)11.(Longispora)12.(Luedemannella)13.微单孢菌属(Micromonospora)14.(Pilimelia)15.(Planopolyspora)16.(Polymorphospora)17.(Salinispora)18.(Spirilliplanes)19.(Verrucosispora)20.(Virgisporangium)9.丙酸杆菌亚目(Propionibacterineae) 1.(Nocardioidaceae)1.(Actinopolymorpha)2.(Aeromicrobium)3.(Friedmanniella)4.(Hongia)5.(Kribbella)6.(Marmoricola)7.(Micropruina)8.(Nocardioides)9.(Pimelobacter)10.(Propionicicella)11.(Propionicimonas)2.丙酸杆菌科(Propionibacteriaceae)1.河口微菌属(Aestuariimicrobium)2.(Arachnia)3.(Brooklawnia)4.(Granulicoccus)5.江氏菌属(Jiangella)6.(Luteococcus)7.(Microlunatus)8.丙酸杆菌属(Propionibacterium)9.(Propioniferax)10.(Propionimicrobium)11.(Tessaracocccus)10.(Pseudonocardineae)1.(Actinosynnemataceae)1.(Actinokineospora)2.(Actinosynnema)3.(Lechevalieria)4.(Lentzea)5.(Saccharothrix)6.(Umezawaea)2.(Pseudonocardiaceae)1.(Actinoalloteichus)2.(Actinobispora)3.(Amycolata)4.(Amycolatopsis)5.(Crossiella)6.(Faenia)7.(Goodfellowia)8.(Kibdelosporangium)9.(Kutzneria)10.(Prauserella)11.(Pseudoamycolata)12.(Pseudonocardia)13.(Saccharomonospora)14.(Saccharopolyspora)15.(Streptoalloteichus)16.(Thermobispora)17.(Thermocrispum)11.链霉菌亚目(Streptomycineae) 1.链霉菌科(Sterptomycetaceae)1.(Actinopycnidium)2.(Actinosporangium)3.(Chainia)4.(Elytrosporangium)5.北里菌属(Kitasatoa)6.北里孢菌属(Kitasatospora)7.(Microellobosporia)8.(Streptacidiphilus)9.链霉菌属(Streptomyces)10.(Streptoverticillium)12.(Streptosporangineae)1.(Nocardiopsaceae)1.(Nocardiopsis)2.(Streptomonospora)3.(Thermobifida)2.(Streptosporangiaceae)1.(Acrocarpospora)2.(Herbidospora)3.(Microbispora)4.(Microtetraspora)5.(Nonomuraea)6.(Planobispora)7.(Planomonospora)8.(Planotetraspora)9.(Sphaerisporangium)10.(Streptosporangium)11.(Thermopolyspora)3.(Thermomonosporaceae)1.珊瑚状放线菌属(Actinocorallia)2.(Actinomadura)3.(Excellospora)4.(Spirillospora)5.(Thermomonospora)2.双歧杆菌目(Bifidobacteriales) 1.双歧杆菌科(Bifidobacteriaceae)1.(Aeriscardovia)2.(Alloscardovia)3.双歧杆菌属(Bifidobacterium)4.(Gardnerella)5.(Metascardovia)6.(Parascardovia)7.(Scardovia)2.科未定3.(Coriobacteridae)1.(Coriobacteriales)1.(Coriobacterineae)1.(Coriobacteriaceae)1.奇异菌属(Atopobium)2.(Collinsella)3.(Coriobacterium)4.(Cryptobacterium)5.(Denitrobacterium)6.(Eggerthella)7.(Olsenella)8.(Slackia)4.红色杆菌亚纲(Rubrobacteridae) 1.红色杆菌目(Rubrobacterales) 1.红色杆菌亚目(Rubrobacterineae) 1.(Conexibacteraceae)1.(Conexibacter)2.(Patulibacteraceae)1.(Patulibacter)3.红色杆菌科(Rubrobacteraceae)1.红色杆菌属(Rubrobacter)4.(Solirubrobacteraceae)1.(Solirubrobacter)5.(Thermoleophilaceae)1.(Thermoleophilum)5.球形杆菌亚纲(Sphaerobacteridae)1.球形杆菌目(Sphaerobacterales)1.球形杆菌亚目(Sphaerobacterineae)1.球形杆菌科(Sphaerobacteraceae)1.球形杆菌属(Sphaerobacter) 3.产水菌门(Aquificae) 3.1 产水菌纲(Aquificae)1.产水菌目(Aquificales)1.产水菌科(Aquificaceae)1.产水菌属(Aquifex)2.(Calderobacterium)3.(Hydrogenivirga)4.(Hydrogenobacter)5.(Hydrogenobaculum)6.(Thermocrinis)2.除硫杆菌科(Desulfurobacteriaceae)1.(Balnearium)2.除硫杆菌属(Desulfurobacterium)3.热弧菌属(Thermovibrio)3.(Hydrogenothermaceae)1.(Hydrogenothermus)2.(Persephonella)3.(Sulfurihydrogenibium)4.拟杆菌门(Bacteroidetes)4.1 拟杆菌纲(Bacteroidetes)1.拟杆菌目(Bacteroidales)1.拟杆菌科(Bacteroidaceae)1.(Acetomicrobium)2.(Anaerophaga)3.(Anaerorhabdus)4.拟杆菌属(Bacteroides)5.(Pontibacter)2.紫单胞菌科(Porphyromonadaceae)1.(Barnesiella)2.(Capsularis)3.(Dysgonomonas)4.(Hallella)5.(Odoribacter)6.(Oribaculum)7.(Paludibacter)8.(Parabacteroides)9.紫单胞菌属(Porphyromonas)10.(Proteiniphilum)11.(Tannerella)12.(Xylanibacter)3.普雷沃氏菌科(Prevotellaceae)1.普雷沃氏菌属(Prevotella)4.理研菌科(Rikenellaceae)1.(Alistipes)2.(Alkaliflexus)3.(Marinilabilia)4.(Petrimonas)5.理研菌属(Rikenella)5.科未定1.(Acetofilamentum)2.(Acetothermus)4.2 黄杆菌纲(Flavobacteria)1.黄杆菌目(Flavobacteriales)1.蟑螂杆状体科(Blattabacteriaceae)1.蟑螂杆状体属(Blattabacterium)2.(Cryomorphaceae)1.(Algoriphagus)2.(Brumimicrobium)3.(Crocinitomix)4.(Cryomorpha)5.(Fluviicola)6.李时珍菌属(Lishizhenia)7.(Owenweeksia)3.黄杆菌科(Flavobacteriaceae)1.(Actibacter)2.(Aequorivita)3.(Algibacter)4.(Aquimarina)5.(Arenibacter)6.伯杰菌属(Bergeyella)7.(Bizionia)8.碳酸噬胞菌属(Capnocytophaga)9.噬纤维素菌属(Cellulophaga)10.金黄杆菌属(Chryseobacterium)11.(Cloacibacterium)12.(Coenonia)13.(Costertonia)14.(Croceibacter)15.独岛菌属(Dokdonia)16.东海菌属(Donghaeana)17.(Elizabethkingia)18.(Empedobacter)19.(Epilithonimonas)20.(Flaviramulus)21.黄杆菌属(Flavobacterium)22.(Formosa)23.泥滩杆菌属(Gaetbulibacter)24.泥滩微菌属(Gaetbulimicrobium)25.(Galbibacter)26.(Gelidibacter)27.(Gillisia)28.(Gilvibacter)29.革兰菌属(Gramella)30.(Kaistella)31.(Kordia)32.(Krokinobacter)33.(Lacinutrix)34.列文虎克菌属(Leeuwenhoekiella)35.(Lutibacter)36.(Maribacter)37.(Mariniflexile)38.(Marixanthomonas)39.(Mesonia)40.(Muricauda)41.(Myroides)42.(Nonlabens)43.(Olleya)44.(Ornithobacterium)45.(Persicivirga)46.(Pibocella)47.极地杆菌属(Polaribacter)48.冷弯菌属(Psychroflexus)49.(Psychroserpens)50.(Riemerella)51.(Robiginitalea)52.(Salegentibacter)53.(Sandarakinotalea)54.(Sediminibacter)55.(Sediminicola)56.世宗菌属(Sejongia)57.(Stanierella)58.(Stenothermobacter)59.(Subsaxibacter)60.(Subsaximicrobium)61.(Tamlana)62.(Tenacibaculum)63.(Ulvibacter)64.(Vitellibacter)65.(Wautersiella)66.(Weeksella)67.(Winogradskyella)68.丽水菌属(Yeosuana)69.(Zeaxanthinibacter)70.周氏菌属(Zhouia)71.(Zobellia)72.王祖农菌属(Zunongwangia) 4.3 鞘脂杆菌纲(Sphingobacteria)1.鞘脂杆菌目(Sphingobacteriales)1.泉发菌科(Crenotrichaceae)1.(Balneola)2.(Chitinophaga)3.泉发菌属(Crenothrix)4.(Rhodothermus)5.(Salinibacter)6.(Terrimonas)7.(Toxothrix)2.(Flammeovirgaceae)1.(Flammeovirga)2.(Flexithrix)3.(Perexilibacter)4.(Persicobacter)5.(Rapidithrix)6.(Sediminitomix)7.(Thermonema)3.屈挠杆菌科(Flexibacteraceae)1.(Adhaeribacter)2.(Aquiflexum)3.(Arcicella)4.(Belliella)5.(Chimaereicella)6.(Cyclobacterium)7.噬胞菌属(Cytophaga)8.(Dyadobacter)9.(Echinicola)10.(Effluviibacter)11.(Emticicia)12.(Fabibacter)13.(Flectobacillus)14.屈挠杆菌属(Flexibacter)15.(Hongiella)16.(Hymenobacter)17.(Larkinella)18.(Leadbetterella)19.(Marinicola)20.(Meniscus)21.(Microscilla)22.(Niastella)23.(Persicitalea)24.(Reichenbachiella)25.(Rhodonellum)26.(Roseivirga)27.(Runella)28.(Spirosoma)29.生孢噬胞菌属(Sporocytophaga) 4.腐螺旋菌科(Saprospiraceae)1.(Aureispira)2.(Haliscomenobacter)3.(Lewinella)4.腐螺旋菌属(Saprospira)5.鞘脂杆菌科(Sphingobacteriaceae)1.(Mucilaginibacter)2.(Olivibacter)3.(Parapedobacter)4.(Pedobacter)5.(Pseudosphingobacterium)6.鞘脂杆菌属(Sphingobacterium) 6.科未定1.(Niabella)4.4 纲未定1.(Flavisolibacter)2.(Fulvivirga)3.(Prolixibacter)5.衣原体门(Chlamydiae)5.1 衣原体纲(Chlamydiae)1.衣原体目(Chlamydiales)1.衣原体科(Chlamydiaceae)1.衣原体属(Chlamydia)2.嗜衣体属(Chlamydophila)2.副衣原体属(Parachlamydiaceae)1.新衣原体属(Neochlamydia)2.副衣原体属(Parachlamydia)3.芯卡体科(Simkaniaceae)1.芯卡体属(Simkania)2.棍衣原体属(Rhabdochlamydia)* 4.华诊体科(Waddliaceae)1.华诊体属(Waddlia)6.绿菌门(Chlorobi)6.1 绿菌纲(Chlorobia)1.绿菌目(Chlorobiales)1.绿菌科(Chlorobiaceae)1.臂绿菌属(Ancalochloris)2.绿棒菌属(Chlorobaculum)3.绿菌属(Chlorobium)4.绿爬菌属(Chloroherpeton)5.暗网菌属(Pelodictyon)6.突柄绿菌属(Prosthecochloris)7.绿弯菌门(Chloroflexi)7.1 厌氧绳菌纲(Anaerolineae)1.厌氧绳菌目(Anaerolineales)1.厌氧绳菌科(Anaerolineaceae)1.厌氧绳菌属(Anaerolinea)2.(Bellilinea)3.纤绳菌属(Leptolinea)4.(Levilinea)5.长绳菌属(Longilinea)7.2 暖绳菌纲(Caldilineae)1.暖绳菌目(Caldilineales)1.暖绳菌科(Caldilineaceae)1.暖绳菌属(Caldilinea)7.3 绿弯菌纲(Chloroflexi)1.绿弯菌目(Chloroflexales)1.绿弯菌科(Chloroflexaceae)1.绿弯菌属(Chloroflexus)2.绿线菌属(Chloronema)3.太阳发菌属(Heliothrix)4.玫瑰弯菌属(Roseiflexus)2.颤绿菌科(Oscillochloridaceae)1.颤绿菌属(Oscillochloris)2.爬管菌目(Herpetosiphonales)1.爬管菌科(Herpetosiphonaceae)1.爬管菌属(Herpetosiphon) 8.产金菌门(Chrysiogenetes) 8.1 产金菌纲(Chrysiogenetes)1.产金菌目(Chrysiogenales)1.产金菌科(Chrysiogenaceae)1.产金菌属(Chrysiogenes) 9.蓝藻门(Cyanobacteria)9.1 蓝藻纲(Cyanobacteria)1.色球藻目(Chroococcales)1.色球藻科(Chroococcaceae)1.管孢藻属(Chamaesiphon)2.色球藻属(Chroococcus)3.(Cyanobacterium)4.(Cyanobium)5.(Cyanothece)6.蓝纤维藻属(Dactylococcopsis)7.(Gloeobacter)8.黏球藻属(Gloeocapsa)9.黏杆藻属(Gloeothece)10.微囊藻属(Microcystis)11.原绿球藻属(Prochlorococcus)12.原绿藻属(Prochloron)13.聚球藻属(Synechococcus)14.集胞藻属(Synechocystis)2.宽球藻目(Pleurocapsales)1.蓝枝藻科(Hyellaceae)1.(Cyanocystis)2.(Dermocarpella)3.(Stanieria)4.异球藻属(Xenococcus)2.宽球藻科(Pleurocapsaceae)1.拟色球藻属(Chroococcidiopsis)2.黏囊藻属(Myxosarcina)3.宽球藻属(Pleurocapsa)3.颤藻目(Oscillatoriales)1.颤藻科(Oscillatoriaceae)1.节螺藻属(Arthrospira)2.(Borzia)3.(Crinalium)4.(Geitlerinema)5.盐螺旋藻属(Halospirulina)6.(Leptolyngbya)7.(Limnothrix)8.鞘丝藻属(Lyngbya)9.微鞘藻属(Microcoleus)10.颤藻属(Oscillatoria)11.(Planktothrix)12.原绿发藻属(Prochlorothrix)13.(Pseudanabaena)14.螺旋藻属(Spirulina15.(Starria)16.束藻属(Symploca)17.束毛藻属(Trichodesmium)18.(Tychonema)4.念珠藻目(Nostocales)1.念珠藻科(Nostocaceae)1.鱼腥藻属(Anabaena)2.项圈藻属(Anabaenopsis)3.束丝藻属(Aphanizomenon)4.(Cyanospira)5.(Cylindrospermopsis)6.筒孢藻属(Cylindrospermum)7.节球藻属(Nodularia)8.念珠藻属(Nostoc)9.伪枝藻属(Scytonema)2.胶须藻科(Rivulariaceae)1.眉藻属(Calothrix)2.胶须藻属(Rivularia)3.单歧藻属(Tolypothrix)5.真枝藻目(Stigonematales)1.真枝藻科(Stigonemataceae)1.(Chlorogloeopsis)2.费氏藻属(Fischerella)3.(Geitleria)4.(Iyengariella)5.拟念珠藻属(Nostochopsis)6.真枝藻属(Stigonema)10.脱铁杆菌门(Deferribacteres)10.1 脱铁杆菌纲(Deferribacteres)1.脱铁杆菌目(Deferribacterales)1.脱铁杆菌科(Deferribacteraceae)1.脱铁杆菌属(Deferribacter)2.(Denitrovibrio)3.(Flexistipes)4.地弧菌属(Geovibrio)5.(Mucispirillum)2.科未定1.暖发菌属(Caldithrix)2.(Synergistes)11.异常球菌-栖热菌门(Deinococcus-Thermus) 11.1 异常球菌纲(Deinococci)1.异常球菌目(Deinococcales)1.异常球菌科(Deinococcaceae)1.异常杆菌属(Deinobacter)2.异常球菌属(Deinococcus)2.特吕珀菌科(Trueperaceae)1.特吕珀菌属(Truepera)2.栖热菌目(Thermales)1.栖热菌科(Thermaceae)1.海栖热菌属(Marinithermus)2.亚栖热菌属(Meiothermus)3.海洋栖热菌属(Oceanithermus)4.栖热菌属(Thermus)5.火山栖热菌属(Vulcanithermus)。

肠杆菌1.肠杆菌属产气肠杆菌、阴沟肠杆菌、聚团肠杆菌、阿斯布肠杆菌、河生肠杆菌生物1群、河生肠杆菌生物2群、中间肠杆菌、格高非肠杆菌、阪崎肠杆菌、泰洛肠杆菌2.埃希菌属大肠埃希菌、福格森氏埃希菌、不活跃大肠埃希菌、伤口大肠埃希菌、赫尔曼氏埃希菌3.沙雷菌属粘质沙雷菌、深红沙雷菌、无花果沙雷菌、泉居沙雷菌、芳香沙雷菌1群、芳香沙雷菌2群、晋城沙雷菌、液化沙雷菌4.克雷伯菌属肺炎克雷伯菌、臭鼻克雷伯菌、鼻硬节克雷伯菌、产酸克雷伯菌、解鸟氨酸克雷伯菌5.变形杆菌属奇异变形杆菌属、普通变形杆菌、潘尼变形杆菌6.普罗威登斯菌属产碱普罗威登菌、斯图普罗威登菌、雷极普罗威登菌、拉氏普罗威登菌7.沙门菌属猪霍乱沙门菌、甲型副伤寒沙门菌、伤寒沙门菌、雏白利沙门菌8.枸橼酸杆菌弗旁地枸橼酸杆菌、异型枸橼酸杆菌、丙二酸盐阴性枸橼酸杆菌美洲爱文菌10.布特维西菌属水生布特维西菌11.爱德华菌属迟缓爱德华菌、保科爱德华菌12.巴提奥杆菌属乡间巴提奥杆菌13.哈夫尼亚菌属蜂房哈夫菌属14.西地西菌属戴氏西地西菌、拉氏西地西菌、奈氏西地西菌15.摩根菌属摩根摩根菌16志贺菌属志贺菌A，B，C 群、宋内志贺菌17.克吕沃菌属抗坏血酸克吕沃菌、栖冷克吕沃菌不脱羧莱克勒菌19 .默勒菌属威斯康星默勒菌20 拉恩菌属水生拉恩菌21.塔特姆菌属、痰塔特姆菌22．耶尔森菌属假结核耶尔森菌、小结肠炎耶尔森菌、中间耶尔森菌、克氏耶尔森菌、费氏耶尔森菌23．不动杆菌属洛菲不动杆菌、溶血不动杆菌、鲍曼不动杆菌、醋酸钙不动杆菌24. 寡养单胞菌属嗜麦芽窄单胞菌非发酵菌1.假单胞菌属铜绿假单胞菌、荧光假单胞菌、恶臭假单胞菌、施氏假单胞菌、门多萨假单胞菌、产碱假单胞菌、假产碱假单胞菌3.丛毛单胞菌属食酸丛毛单胞菌、睾丸酮丛毛单胞菌4.短波单胞菌属缺陷短波单胞菌、波囊短波单胞菌5.窄食单胞菌属嗜麦芽窄单胞菌6.产碱杆菌属木糖氧化产碱杆菌反硝化亚种、木糖氧化产碱杆菌木糖氧化亚种、粪产碱杆菌7. 不动杆菌属洛菲不动杆菌、醋酸钙不动杆菌、溶血不动杆菌、鲍曼不动杆菌8.黄杆菌属脑膜败血性黄杆菌、芳香黄杆菌、Ⅱb群黄杆菌、产吲哆黄杆菌9.威克斯菌属有毒威克斯菌、动物溃疡威克斯菌10.金色单胞菌属浅黄假单胞菌11.黄色单胞菌属12.弧菌属霍乱弧菌、副溶血弧菌、溶藻弧菌、河流弧菌、创伤弧菌13气单胞菌属嗜水气单胞菌、温和气单胞菌、杀鲑气单胞菌、舒伯特气单胞菌、豚鼠气单胞菌14邻单胞菌属类志贺邻单胞菌15巴斯德菌属多杀巴斯德菌、溶血巴斯德菌16莫拉氏菌属莫拉氏菌17谢瓦纳拉菌属腐败谢瓦纳拉菌.葡萄球菌/微球菌1．葡萄球菌属金黄色葡萄球菌，金黄色葡萄球菌厌氧亚种，表皮葡萄球菌，头葡萄球菌，解糖葡萄球菌，华纳葡萄球菌，溶血葡萄球菌，人葡萄球菌、路邓葡萄球菌、斯莱福葡萄球菌、耳葡萄球菌、腐生葡萄球菌、孔氏葡萄球菌、木糖葡萄球菌、阿莱特葡萄球菌、模仿葡萄球菌、中间葡萄球菌、猪葡萄球菌、缓慢葡萄球菌2. 微球菌属微球菌，易变微球菌，玫瑰微球菌，克里斯汀微球菌链球菌/肠球菌1肠球菌属酪黄肠球菌，粪肠球菌，屎肠球菌，鸟肠球菌，母鸡肠球菌，坚韧肠球菌2.草绿色链球菌属牛链球菌，唾液链球菌，血液链球菌，中间链球菌，缓症链球菌，变异链球菌群3.β溶血链球菌群化脓性链球菌，无乳链球菌，马链球菌，兽瘟链球菌，似马链球菌，停乳链球菌，β溶血链球菌4.咽峡炎链球菌群星座链球菌，咽峡炎链球菌5.孪生球菌属溶血孪生球菌，麻疹孪生球菌6.肺炎链球菌属肺炎链球菌7.气球菌属绿色气球菌真菌1.隐球菌属新型隐球菌，白色隐球菌，罗伦隐球菌，地生隐球菌，指甲隐球菌2.假丝酵母菌属白假丝酵母菌，白色假丝酵母菌生物变种，季也蒙假丝酵母菌，乳酒假丝酵母菌，克柔假丝酵母菌，溶脂假丝酵母菌，葡萄牙假丝酵母菌，近平滑假丝酵母菌、伪热带蒙假丝酵母菌、皱褶假丝酵母菌、热带假丝酵母菌、光滑假丝酵母菌、涏沫假丝酵母菌3.酵母属酿酒酵母菌4.丝孢酵母属白吉利丝孢酵母菌5.地霉属白地霉菌6.红酵母属粘红酵母菌，深红酵母菌7.毛孢子菌属白杰尔毛孢子菌8.地丝菌属念珠地丝菌。

肠杆菌1.肠杆菌属产气肠杆菌、阴沟肠杆菌、聚团肠杆菌、阿斯布肠杆菌、河生肠杆菌生物1群、河生肠杆菌生物2群、中间肠杆菌、格高非肠杆菌、阪崎肠杆菌、泰洛肠杆菌2.埃希菌属大肠埃希菌、福格森氏埃希菌、不活跃大肠埃希菌、伤口大肠埃希菌、赫尔曼氏埃希菌3.沙雷菌属粘质沙雷菌、深红沙雷菌、无花果沙雷菌、泉居沙雷菌、芳香沙雷菌1群、芳香沙雷菌2群、晋城沙雷菌、液化沙雷菌4.克雷伯菌属肺炎克雷伯菌、臭鼻克雷伯菌、鼻硬节克雷伯菌、产酸克雷伯菌、解鸟氨酸克雷伯菌5.变形杆菌属奇异变形杆菌属、普通变形杆菌、潘尼变形杆菌6.普罗威登斯菌属产碱普罗威登菌、斯图普罗威登菌、雷极普罗威登菌、拉氏普罗威登菌7.沙门菌属猪霍乱沙门菌、甲型副伤寒沙门菌、伤寒沙门菌、雏白利沙门菌8.枸橼酸杆菌弗旁地枸橼酸杆菌、异型枸橼酸杆菌、丙二酸盐阴性枸橼酸杆菌9.爱文菌属美洲爱文菌10.布特维西菌属水生布特维西菌11.爱德华菌属迟缓爱德华菌、保科爱德华菌12.巴提奥杆菌属乡间巴提奥杆菌13.哈夫尼亚菌属蜂房哈夫菌属14.西地西菌属戴氏西地西菌、拉氏西地西菌、奈氏西地西菌15.摩根菌属摩根摩根菌16志贺菌属志贺菌A，B，C 群、宋内志贺菌17.克吕沃菌属抗坏血酸克吕沃菌、栖冷克吕沃菌18．莱克勒菌属不脱羧莱克勒菌19 .默勒菌属威斯康星默勒菌20 拉恩菌属水生拉恩菌21.塔特姆菌属、痰塔特姆菌22．耶尔森菌属假结核耶尔森菌、小结肠炎耶尔森菌、中间耶尔森菌、克氏耶尔森菌、费氏耶尔森菌23．不动杆菌属洛菲不动杆菌、溶血不动杆菌、鲍曼不动杆菌、醋酸钙不动杆菌24. 寡养单胞菌属嗜麦芽窄单胞菌非发酵菌1.假单胞菌属铜绿假单胞菌、荧光假单胞菌、恶臭假单胞菌、施氏假单胞菌、门多萨假单胞菌、产碱假单胞菌、假产碱假单胞菌2.伯克霍尔德氏菌属鼻疽伯克霍尔德氏菌、假鼻疽伯克霍尔德氏菌、洋葱伯克霍尔德氏菌、唐菖蒲伯克霍尔德氏菌3.丛毛单胞菌属食酸丛毛单胞菌、睾丸酮丛毛单胞菌4.短波单胞菌属缺陷短波单胞菌、波囊短波单胞菌5.窄食单胞菌属嗜麦芽窄单胞菌6.产碱杆菌属木糖氧化产碱杆菌反硝化亚种、木糖氧化产碱杆菌木糖氧化亚种、粪产碱杆菌7. 不动杆菌属洛菲不动杆菌、醋酸钙不动杆菌、溶血不动杆菌、鲍曼不动杆菌8.黄杆菌属脑膜败血性黄杆菌、芳香黄杆菌、Ⅱb群黄杆菌、产吲哆黄杆菌9.威克斯菌属有毒威克斯菌、动物溃疡威克斯菌10.金色单胞菌属浅黄假单胞菌11.黄色单胞菌属栖稻假单胞菌12.弧菌属霍乱弧菌、副溶血弧菌、溶藻弧菌、河流弧菌、创伤弧菌13气单胞菌属嗜水气单胞菌、温和气单胞菌、杀鲑气单胞菌、舒伯特气单胞菌、豚鼠气单胞菌14邻单胞菌属类志贺邻单胞菌15巴斯德菌属多杀巴斯德菌、溶血巴斯德菌16莫拉氏菌属莫拉氏菌17谢瓦纳拉菌属腐败谢瓦纳拉菌.葡萄球菌/微球菌1．葡萄球菌属金黄色葡萄球菌，金黄色葡萄球菌厌氧亚种，表皮葡萄球菌，头葡萄球菌，解糖葡萄球菌，华纳葡萄球菌，溶血葡萄球菌，人葡萄球菌、路邓葡萄球菌、斯莱福葡萄球菌、耳葡萄球菌、腐生葡萄球菌、孔氏葡萄球菌、木糖葡萄球菌、阿莱特葡萄球菌、模仿葡萄球菌、中间葡萄球菌、猪葡萄球菌、缓慢葡萄球菌2. 微球菌属微球菌，易变微球菌，玫瑰微球菌，克里斯汀微球菌链球菌/肠球菌1肠球菌属酪黄肠球菌，粪肠球菌，屎肠球菌，鸟肠球菌，母鸡肠球菌，坚韧肠球菌2.草绿色链球菌属牛链球菌，唾液链球菌，血液链球菌，中间链球菌，缓症链球菌，变异链球菌群3.β溶血链球菌群化脓性链球菌，无乳链球菌，马链球菌，兽瘟链球菌，似马链球菌，停乳链球菌，β溶血链球菌4.咽峡炎链球菌群星座链球菌，咽峡炎链球菌5.孪生球菌属溶血孪生球菌，麻疹孪生球菌6.肺炎链球菌属肺炎链球菌7.气球菌属绿色气球菌真菌1.隐球菌属新型隐球菌，白色隐球菌，罗伦隐球菌，地生隐球菌，指甲隐球菌2.假丝酵母菌属白假丝酵母菌，白色假丝酵母菌生物变种，季也蒙假丝酵母菌，乳酒假丝酵母菌，克柔假丝酵母菌，溶脂假丝酵母菌，葡萄牙假丝酵母菌，近平滑假丝酵母菌、伪热带蒙假丝酵母菌、皱褶假丝酵母菌、热带假丝酵母菌、光滑假丝酵母菌、涏沫假丝酵母菌3.酵母属酿酒酵母菌4.丝孢酵母属白吉利丝孢酵母菌5.地霉属白地霉菌6.红酵母属粘红酵母菌，深红酵母菌7.毛孢子菌属白杰尔毛孢子菌8.地丝菌属念珠地丝菌。

⏹G+球菌⏹葡萄球菌属⏹金黄色葡萄球菌－MSSA，MRSA⏹凝固酶阴性葡萄球菌－MSCNS，MRCNS⏹链球菌属⏹化脓链球菌－（b-溶血）⏹草绿色链球菌－（a-溶血）⏹肺炎链球菌（双球菌）⏹粪肠球菌⏹屎肠球菌⏹G+杆菌⏹无芽孢杆菌⏹棒状杆菌－白喉杆菌⏹李斯特菌⏹有芽孢杆菌⏹炭疽杆菌（需氧菌）⏹艰难梭菌（厌氧菌）⏹G-杆菌⏹肠杆菌属：产气、阴沟⏹埃希菌属：大肠埃希菌⏹志贺菌属：痢疾杆菌⏹克雷伯菌属：肺克、产酸克⏹变形菌属：奇异变形杆菌⏹沙门菌属：伤寒、副伤寒沙门菌、肠炎沙门菌⏹沙雷菌属：⏹其它：枸橼酸杆菌属、摩根菌属⏹嗜血杆菌属：流感、副流感嗜血杆菌⏹军团菌属：嗜肺军团菌⏹弯曲杆菌属：空肠、大肠弯曲菌⏹螺旋菌属：幽门螺旋菌⏹弧菌属：霍乱弧菌⏹假单胞属：铜绿假单胞菌、嗜麦芽寡养假单胞菌（嗜麦芽黄单胞菌、嗜麦芽窄食单胞菌）⏹不动杆菌⏹产碱杆菌⏹G-球菌⏹淋病奈瑟菌（淋球菌）⏹脑膜炎奈瑟菌（脑膜炎双球菌）⏹老年患者应用抗生素特点⏹组织器官呈生理性退行性变（肾功能、肝功能）⏹免疫功能也见减退⏹发生不良反应多见，但不典型⏹用药注意事项⏹肾功减退，成人正常剂量，可能造成蓄积→估算肌酐清除率，调整给药方案⏹易发生不良反→选用低毒杀菌剂抗菌药物，毒性大的氨基糖苷类、万古霉素、去甲万古霉素等药物应尽可能避免应用，注意血药浓度监测FDA妊娠期用药分类抗菌药物的分类⏹杀菌剂⏹繁殖期杀菌剂：如青霉素类、头孢菌素类、氟喹诺酮类⏹静止期杀菌剂：如氨基苷类、多粘霉素类⏹抑菌剂⏹快效抑菌剂：如大环内酯类、四环素类、氯霉素类⏹慢效抑菌剂：如磺胺药⏹按抗菌谱⏹窄谱异烟肼、夫西地酸、氨曲南⏹广谱四环素、氟喹诺酮、碳青霉烯类、两性霉素B（此文档部分内容来源于网络，如有侵权请告知删除，文档可自行编辑修改内容，供参考，感谢您的配合和支持）。

环丝菌属(Brochothrix)李斯特氏菌属(Listeria) (Paenibacillaceae) (Ammoniphilus)(Aneurinibacillus)(Brevibacillus)(Cohnella)(Oxalophagus)(Paenibacillus)(Thermicanus)(Thermobacillus) (Planococcaceae)(Filibacter)(Kurthia)(Planococcus)(Planomicrobium)(Sporosarcina)芽孢乳杆菌科(Sporolactobacillaceae) (Marinococcus)(Sinococcus)芽孢乳杆菌属(Sporolactobacillus) (Tuberibacillus)葡萄球菌科(Staphylococcaceae)孪生菌属(Gemella) (Joetgalicoccus)(Macrococcus)(Salinicoccus)葡萄球菌属(Staphylococcus) (Thermoactinomycetaceae) (Laceyella)(Mechercharimyces)(Planifilum)(Seinonella)(Shimazuella) (Thermoactinomyces) (Thermoflavimicrobium) (Turicibacteraceae)(Turicibacter)科未定(Pullulanibacillus)乳杆菌目(Lactobacillales)气球菌科(Aerococcaceae) (Abiotrophia)气球菌属(Aerococcus)(Dolosicoccus)(Eremococcus)(Facklamia)(Globicatella)(Ignavigranum)肉杆菌科(Carnobacteriaceae)(Agitococcus)(Alkalibacterium)(Allofustis)(Alloiococcus)(Atopococcus)(Atopostipes)肉杆菌属(Carnobacterium)德库菌属(Desemzia) （DSMZ，德国微生物与细胞保藏中心）(Dolosigranulum)(Granulicatella)(Isobaculum)(Lactosphaera)(Marinilactibacillus)(Trichococcus)肠球菌科(Enterococcaceae)(Atopobacter)(Catellicoccus)肠球菌属(Enterococcus)(Melissococcus)(Pilibacter)(Tetragenococcus)漫游球菌属(Vagococcus)乳杆菌科(Lactobacillaceae)乳杆菌属(Lactobacillus)(Paralactobacillus)片球菌属(Pediococcus)明串珠菌科(Leuconostocaceae)明串珠菌属(Leuconostoc)(Oenococcus)(Weissella)颤螺旋菌科(Oscillospiraceae)颤杆菌克(Oscillibacter)颤螺旋菌属(Oscillospira)链球菌科(Streptococcaceae)乳球菌属(Lactococcus)(Lactovum)链球菌属(Streptococcus)科未定(Acetoanaerobium)互营球菌属(Syntrophococcus)梭菌纲(Clostridia)梭菌目(Clostridiales)梭菌科(Clostridiaceae) (Acetanaerobacterium) (Acetivibrio) (Acidaminobacter) (Alkaliphilus) (Anaerobacter) (Anaerotruncus) (Anoxynatronum) (Bryantella) (Caloramator) (Caloranaerobacter) (Caminicella) (Clostridiisalibacter)梭菌属(Clostridium) (Coprobacillus)(Dorea)(Ethanoligenens) (Faecalibacterium) (Fastidiosipila) (Garciella)(Gracilibacter) (Guggenheimella) (Hespellia)(Natronincola) (Oxobacter) (Parasporobacterium)八叠球菌属(Sarcina) (Soehngenia) (Sporacetigenium) (Sporobacter) (Subdoligranulum) (Tepidibacter) (Tepidimicrobium) (Thermobrachium) (Thermohalobacter) (Tindallia)优杆菌科(Eubacteriaceae)醋杆菌属(Acetobacterium) (Alkalibacter)(Anaerofustis)(Anaerovorax)优杆菌属(Eubacterium) (Mogibacterium) (Pseudoramibacter)太阳杆菌科(Heliobacteriaceae)太阳杆状菌属(Heliobacillus)太阳杆菌属(Heliobacterium)嗜日菌属(Heliophilum) (Heliorestis)毛螺旋菌科(Lachnospiraceae) (Acetitomaculum)(Anaerofilum)(Anaerostipes)丁酸弧菌属(Butyrivibrio) (Catenibacterium)(Catonella)粪球菌属(Coprococcus) (Johnsonella)(Lachnobacterium)毛螺旋菌属(Lachnospira) (Moryella)(Oribacterium)假丁酸弧菌属(Pseudobutyrivibrio) (Roseburia)瘤胃球菌属(Ruminococcus) (Shuttleworthia) (Sporobacterium)消化球菌科(Peptococcaceae) (Carboxydothermus) (Cryptanaerobacter) (Dehalobacter) (Desulfitobacterium) (Desulfonispora) (Desulfosporosinus) (Desulfotomaculum) (Pelotomaculum)消化球菌属(Peptococcus) (Syntrophobotulus)(Thermincola) (Thermoterrabacterium)消化链球菌科(Peptostreptococcaceae) (Anaerococcus)(Filifactor)(Finegoldia)(Fusibacter)(Gallicola)(Helcococcus)微单胞菌属(Parvimonas) （原名Micromonas）(Peptoniphilus)消化链球菌属(Peptostreptococcus) (Sedimentibacter)(Sporanaerobacter)(Tissierella)互营单胞菌科(Syntrophomonadaceae) (Aminiphilus)(Aminobacterium)(Aminomonas)(Anaerobaculum)(Anaerobranca)(Caldicellulosiruptor) (Carboxydocella)(Dethiosulfovibrio)(Pelospora)互营单胞菌属(Syntrophomonas) (Syntrophospora)互营热菌属(Syntrophothermus) (Thermaerobacter)(Thermanaerovibrio) (Thermohydrogenium)(Thermosyntropha)(Thermovirga)韦荣氏菌科(Veillonellaceae) (Acetonema)氨基酸球菌属(Acidaminococcus) (Allisonella)(Anaeroarcus)(Anaeroglobus)(Anaeromusa)(Anaerosinus)(Anaerovibrio)(Centipeda)(Dendrosporobacter)(Dialister)(Megamonas)(Megasphaera)光冈菌属(Mitsuokella)(Papillibacter)(Pectinatus)(Pelosinus)(Phascolarctobacterium) (Propionispira)(Propionispora)(Quinella)(Schwartzia)新月形单胞菌属(Selenomonas)鼠孢菌属(Sporomusa)(Sporotalea)(Succiniclasticum)(Succinispira)(Thermosinus)韦荣氏菌属(Veillonella) (Zymophilus)科未定(Anaerovirgula)(Dethiosulfatibacter) (Geosporobacter)(Howardella)(Proteiniborus)盐厌氧菌目(Halanaerobiales)盐厌氧菌科(Halanaerobiaceae)盐厌氧菌属(Halanaerobium) (Halocella)(Haloincola)(Halothermothrix)盐拟杆菌科(Halobacteroidaceae) (Acetohalobium)(Halanaerobacter)盐拟杆菌属(Halobacteroides) (Halonatronum)(Natroniella)(Orenia)(Selenihalanaerobacter) (Sporohalobacter)盐碱厌氧菌目(Natranaerobiales)盐碱厌氧菌科(Natranaerobiaceae)盐碱厌氧菌属(Natranaerobius)热厌氧杆菌目(Thermoanaerobacteriales) 热厌氧杆菌科(Thermoanaerobacteriaceae) (Acetogenium)(Ammonifex)(Caldanaerobacter)(Carboxydibrachium) (Coprothermobacter) (Desulfovirgula)(Gelria)(Mahella)(Moorella)(Sporotomaculum) (Tepidanaerobacter) (Thermacetogenium)热厌氧单胞菌属(Thermanaeromonas) (Thermoanaerobacter) (Thermoanaerobium) (Thermoanaerobacterium)热厌氧菌属(Thermoanaerobium) (Thermobacteroides) (Thermosediminibacter) (Thermovenabulum)热脱硫菌科(Thermodesulfobiaceae) 热脱硫菌属(Thermodesulfobium)目未定(Desulfitibacter) (Symbiobacterium)热石杆菌纲(Thermolithobacteria)热石杆菌目(Thermolithobacterales) 热石杆菌科(Thermolithobacteraceae) 热石杆菌属(Thermolithobacter)梭杆菌门(Fusobacteria)梭杆菌纲(Fusobacteria)梭杆菌目(Fusobacteriales)梭杆菌科(Fusobacteriaceae)梭杆菌属(Fusobacterium) (Ilyobacter)纤毛菌属(Leptotrichia) (Propionigenium)(Sebaldella)(Sneathia)(Streptobacillus)科未定(Cetobacterium)芽单胞菌门(Gemmatimonadetes)芽单胞菌纲(Gemmatimonadetes)芽单胞菌目(Gemmatimonadales)芽单胞菌科(Gemmatimonadaceae)芽单胞菌属(Gemmatimonas)黏胶球形菌门(Lentisphaerae)黏胶球形菌纲(Lentisphaerae)黏胶球形菌目(Lentisphaerales)黏胶球形菌科(Lentisphaeraceae)黏胶球形菌属(Lentisphaera)食物谷菌目(Victivallales)食物谷菌科(Victivallaceae)食物谷菌属(Victivallis)硝化螺旋菌门(Nitrospirae)硝化螺旋菌纲(Nitrospira)硝化螺旋菌目(Nitrospirales)硝化螺旋菌科(Nitrospiraceae)钩端螺菌属(Leptospirillum)硝化螺旋菌属(Nitrospira)磁杆菌属(Magnetobacterium)*热脱硫弧菌属(Thermodesulfovibrio)浮霉菌门(Planctomycetes)浮霉菌纲(Planctomycetacia)浮霉菌目(Planctomycetales)浮霉菌科(Planctomycetaceae) (Blastopirellula)(Gemmata)(Isosphaera)小梨形菌属(Pirellula)浮霉菌属(Planctomycetes)红小梨形菌属(Rhodopirellula) (Schlesneria)科未定（均未能分离培养，见厌氧氨氧化菌）(Brocadia)*(Kuenenia)*(Scalindua)*海绵杆菌门(Poribacteria)*变形菌门(Proteobacteria)α-变形菌纲(Alphaproteobacteria) 柄杆菌目(Caulobacterales)柄杆菌科(Caulobacteraceae) (Asticcacaulis)短波单胞菌属(Brevundimonas)柄杆菌属(Caulobacter)苯基杆菌属(Phenylobacterium) (Kordiimonadales) (Kordiimonadaceae) (Kordiimonas)短小盒菌目(Parvularculales)短小盒菌科(Parvularculaceae)短小盒菌属(Parvularcula)根瘤菌目(Rhizobiales)橙单胞菌科(Aurantimonadaceae)橙单胞菌属(Aurantimonas) (Fulvimarina)(Martelella)巴通体科(Bartonellaceae)巴通体属(Bartonella) (Grahamella)(Rochalimaea)拜叶林克氏菌科(Beijerinckiaceae) 拜叶林克氏菌属(Beijerinckia) (Chelatococcus) (Methylocapsa)(Methylocella)慢生根瘤菌科(Bradyrhizobiaceae) 阿菲波菌属(Afipia)农单胞菌属(Agromonas) (Balneimonas)芽生杆菌属(Blastobacter) (Bosea)慢生根瘤菌属(Bradyrhizobium)硝化杆菌属(Nitrobacter) (Oligotropha)(Rhodoblastus)红假单胞菌属(Rhodopseudomonas) 布鲁氏菌科(Brucellaceae)布鲁氏菌属(Brucella) (Crabtreella)(Daeguia)支动菌属(Mycoplana)苍白杆菌属(Ochrobactrum)(Pseudochrobactrum)黏着杆菌科(Cohaesibacteraceae) 黏着杆菌属(Cohaesibacter)生丝微菌科(Hyphomicrobiaceae) (Ancalomicrobium) (Angulomicrobium)水杆菌属(Aquabacter)芽绿菌属(Blastochloris) (Devosia)(Dichotomicrobium) (Filomicrobium)(Gemmiger)生丝微菌属(Hyphomicrobium) (Methylorhabdus)土微菌属(Pedomicrobium)突柄微菌属(Prosthecomicrobium) 红微菌属(Rhodomicrobium) (Rhodoplanes)(Seliberia)甲基杆菌科(Methylobacteriaceae) (Meganema)甲基杆菌属(Methylobacterium) (Microvirga)(Protomonas)甲基孢囊菌科(Methylocystaceae) (Albibacter)甲基孢囊菌属(Methylocystis) (Methylopila)(Methylosinus) (Pleomorphomonas) (Terasakiella)叶杆菌科(Phyllobacteriaceae) (Aminobacter) (Aquamicrobium) (Defluvibacter)(Hoeflea)中慢生根瘤菌属(Mesorhizobium) (Nitratireductor)叶杆菌属(Phyllobacterium) (Pseudaminobacter)根瘤菌科(Rhizobiaceae)土壤杆菌属(Agrobacterium)异根瘤菌属(Allorhizobium)嗜碳菌属(Carbophilus)螯合杆菌属(Chelatobacter)剑菌属(Ensifer)(Kaistia)韧皮杆菌属(Liberibacter)*根瘤菌属(Rhizobium)中华根瘤菌属(Sinorhizobium) 红菌科(Rhodobiaceae) (Anderseniella) (Parvibaculum)红菌属(Rhodobium)玫瑰螺菌属(Roseospirillum)黄色杆菌科(Xanthobacteraceae) (Ancylobacter) (Azorhizobium)(Labrys)(Pseudolabrys)(Starkeya)黄色杆菌属(Xanthobacter)科未定(Sneathiella)红杆菌目(Rhodobacterales)生丝单胞菌科(Hyphomonadaceae) (Hirschia)生丝单胞菌属(Hyphomonas) (Maricaulis)(Oceanicaulis) (Robiginitomaculum)红杆菌科(Rhodobacteraceae) (Ahrensia)(Albidovulum) (Amaricoccus) (Antarctobacter) (Catellibacterium) (Citreicella)(Citreimonas) (Dinoroseobacter) (Donghicola) (Gemmobacter) (Haematobacter) (Jannaschia) (Ketogulonicigenium) (Labrenzia)(Leisingera)(Loktanella)(Maribius)(Marinovum) (Maritimibacter) (Methylarcula)(Nereida)(Nesiotobacter) (Oceanibulbus)海洋生菌属(Oceanicola) (Octadecabacter) (Palleronia) (Pannonibacter)副球菌属(Paracoccus) (Pelagibaca)(Phaeobacter)假红杆菌属(Pseudorhodobacter) (Pseudovibrio) (Rhodobaca)红杆菌属(Rhodobacter) (Rhodothalassium)小红卵菌属(Rhodovulum) (Roseibacterium) (Roseibium)(Roseicyclus) (Roseinatronobacter) (Roseisalinus)(Roseivivax)玫瑰杆菌属(Roseobacter) (Roseovarius) (Rubellimicrobium) (Rubrimonas)(Ruegeria)(Sagittula)(Salipiger)(Shimia)(Silicibacter)(Staleya)(Stappia)(Sulfitobacter) (Tateyamaria) (Thalassobacter) (Thalassobius) (Thalassococcus) (Thioclava)硫球形菌属(Thiosphaera)(Wenxinia)木洞菌属(Woodsholea)杨氏菌属(Yangia)红螺菌目(Rhodospirillales)醋杆菌科(Acetobacteraceae)醋杆菌属(Acetobacter) (Acidicaldus)嗜酸菌属(Acidiphilium)酸球形菌属(Acidisphaera)酸胞菌属(Acidocella)酸单胞菌属(Acidomonas) (Asaia)(Belnapia)脆弱球菌属(Craurococcus)葡糖醋杆菌属(Gluconacetobacter) 葡糖杆菌属(Gluconobacter) (Granulibacter)(Kozakia)鼠球菌属(Muricoccus) (Neoasaia) (Paracraurococcus)红球状菌属(Rhodopila) (Rhodovarius)玫瑰球菌属(Roseococcus)玫瑰单胞菌属(Roseomonas) (Rubritepida) (Saccharibacter)(Stella)(Swaminathania) (Teichococcus)(Zavarzinia)红螺菌科(Rhodospirillaceae)固氮螺菌属(Azospirillum) (Conglomeromonas) (Defluviicoccus)(Inquilinus)磁螺菌属(Magnetospirillum) (Phaeospirillum) (Rhodocista)红螺旋菌属(Rhodospira)红螺菌属(Rhodospirillum)红弧菌属(Rhodovibrio)玫瑰螺旋菌属(Roseospira) (Skermanella)(Telmatospirillum) (Thalassospira)(Tistrella)立克次体目(Rickettsiales)无形体科(Anaplasmataceae) (Aegyptianella)无形体属(Anaplasma) (Cowdria)埃里希体属(Ehrlichia)新立克次体属(Neorickettsia)沃巴赫体属(Wolbachia) (Xenohaliotis)*全孢菌科(Holosporaceae)全孢菌属(Holospora)立克次体科(Rickettsiaceae) (Orientia)立克次体属(Rickettsia)SAR 11群*远洋杆菌属(Pelagibacter)*科未定(Lyticum)(Odyssella)* (Pseudocaedibacter) (Symbiotes)(Tectibacter)鞘脂单胞菌目(Sphingomonadales) 赤杆菌科(Erythrobacteraceae) (Altererythrobacter)赤杆菌属(Erythrobacter)赤微菌属(Erythromicrobium)紫杆菌属(Porphyrobacter)鞘脂单胞菌科(Sphingomonadaceae) 芽单胞菌属(Blastomonas)柠檬酸微菌属(Citromicrobium)* 赤单胞菌属(Erythromonas)新鞘脂菌属(Novosphingobium) (Sandaracinobacter) (Sandaracinorhabdus）鞘脂菌属(Sphingobium)鞘脂单胞菌属(Sphingomonas) (Sphingopyxis) (Sphingosinicella)发酵单胞菌属(Zymomonas)目未定(Albimonas)(Caenispirillum) (Insolitispirillum) (Novispirillum)β-变形菌纲(Betaproteobacteria) 伯克氏菌目(Burkholderiales)产碱菌科(Alcaligenaceae)无色杆菌属(Achromobacter) (Advenella)产碱菌属(Alcaligenes) (Azohydromonas)博德氏菌属(Bordetella) (Brackiella)(Castellaniela)德克斯氏菌属(Derxia) (Kerstersia)(Oligella)(Pelistega)(Pigmentiphaga) (Pusillimonas)(Sutterella)(Taylorella) (Tetrathiobacter)伯克氏菌科(Burkholderiaceae)伯克氏菌属(Burkholderia) (Chitinimonas)(Cupriavidus)(Lautropia)(Limnobacter)(Pandoraea)(Paucimonas) (Polynucleobacter)青枯菌属(Ralstonia) (Thermothrix)沃特氏菌属(Wautersia)丛毛单胞菌科(Comamonadaceae)食酸菌属(Acidovorax) (Alcycliphilus) (Brachymonas) (Caenibacterium) (Caldimonas)丛毛单胞菌属(Comamonas) (Curvibacter)代尔夫特菌属(Delftia) (Diaphorobacter) (Giesbergeria)噬氢菌属(Hydrogenophaga) (Hylemonella) (Lampropedia) (Macromonas)(Malikia)(Ottowia)(Pelomonas) (Polaromonas) (Ramlibacter)红育菌属(Rhodoferax) (Schlegelella) (Simplicispira)贪食菌属(Variovorax) (Xenophilus)草酸杆菌科(Oxalobacteraceae) (Collimonas)(Duganella) (Herbaspirillum) (Herminiimonas) (Janthinobacterium) (Massilia)(Naxibacter) (Oxalicibacterium)草酸杆菌属(Oxalobacter) (Telluria) (Undibacterium)科未定(Aquabacterium) (Aquincola)(Ideonella)纤发菌属(Leptothrix) (Methylibium)(Mitsuaria)(Paucibacter) (Roseateles)红长命菌属(Rubrivivax) (Sphaerotilus) (Tepidicella) (Tepidimonas)(Thiobacter)硫单胞菌属(Thiomonas)(Xylophilus)嗜氢菌目(Hydrogenophilales)嗜氢菌科(Hydrogenophilaceae)嗜氢菌属(Hydrogenophilus) (Petrobacter)(Tepidiphilus)硫杆状菌属(Thiobacillus)嗜甲基菌目(Methylophilales)嗜甲基菌科(Methylophilaceae) (Methylobacillus)嗜甲基菌属(Methylophilus) (Methylotenera) (Methylovorus)奈瑟菌目(Neisseriales)奈瑟菌科(Neisseriaceae) (Alysiella)(Andreprevotia)水螺菌属(Aquaspirillum) (Aquitalea)(Bergeriella)(Chitinibacter) (Chitinilyticum)色杆菌属(Chromobacterium) (Conchiformibius)(Deefgea)艾肯氏菌属(Eikenella) (Formivibrio)(Gulbenkiania)(Iodobacter)金氏菌属(Kingella)鸥杆菌属(Laribacter)(Leeia)(Microvirgula)(Morococcus)奈瑟菌属(Neisseria) (Paludibacterium) (Prolinoborus)(Silvimonas)(Simonsiella)(Uruburuella)(Vitreoscilla)(Vogesella)亚硝化单胞菌目(Nitrosomonadales) 嘉利翁氏菌科(Gallionellaceae)嘉利翁氏菌属(Gallionella)亚硝化单胞菌科(Nitrosomonadaceae) 亚硝化叶菌属(Nitrosolobus)亚硝化单胞菌属(Nitrosomonas)亚硝化螺旋菌属(Nitrosospira)螺菌科(Spirillaceae)螺菌属(Spirillum)普罗卡杆菌目(Procabacteriales)* 普罗卡杆菌科(Procabacteriaceae)* 普罗卡杆菌属(Procabacter)*红环菌目(Rhodocyclales)红环菌科(Rhodocyclaceae)固氮弓菌属(Azoarcus) (Azonexus)(Azospira)(Azovibrio)(Dechloromonas) (Dechlorosoma)(Denitratisoma) (Ferribacterium) (Methyloversatilis)丙酸杆菌属(Propionibacter) (Propionivibrio) (Quatrionicoccus)红环菌属(Rhodocyclus) (Shinella)(Sterolibacterium)陶厄氏菌属(Thauera) (Uliginosibacterium)动胶菌属(Zoogloea)δ-变形菌纲(Deltaproteobacteria) 蛭弧菌目(Bdellovibrionales) (Bacteriovoracaceae) (Bacteriovorax)(Peredibacter)蛭弧菌科(Bdellovibrionaceae)蛭弧菌属(Bdellovibrio) (Micavibrio)(Vampirovibrio)脱硫盒菌目(Desulfarculales)脱硫盒菌科(Desulfarculaceae)脱硫盒菌属(Desulfarculus)脱硫杆菌目(Desulfobacterales)(Desulfatibacillum) (Desulfatiferula) (Desulfatirhabdium)脱硫杆菌属(Desulfobacter) (Desulfobacterium) (Desulfobacula) (Desulfobotulus)* (Desulfocella) (Desulfococcus)(Desulfofaba)(Desulfofrigus) (Desulfomusa)(Desulfonema)(Desulforegula) (Desulfosarcina) (Desulfospira) (Desulfotignum) (Desulfobulbaceae) (Desulfobulbus) (Desulfocapsa)(Desulfofustis)(Desulfopila) (Desulforhopalus) (Desulfotalea) (Nitrospinaceae)(Nitrospina)脱硫弧菌目(Desulfovibrionales) (Desulfohalobiaceae) (Desulfohalobium) (Desulfonatronovibrio) (Desulfonauticus) (Desulfothermus) (Desulfovermiculus) (Desulfomicrobiaceae) (Desulfomicrobium) (Desulfonatronaceae) (Desulfonatronum)脱硫弧菌科(Desulfovibrionaceae) (Bilophila)(Desulfomonas)脱硫弧菌属(Desulfovibrio) (Lawsonia)硫还原菌目(Desulfurellales)硫还原菌属(Desulfurella) (Hippea)除硫单胞菌目(Desulfuromonadales) 除硫单胞菌科(Desulfuromonadaceae) 除硫单胞菌属(Desulfuromonas) (Desulfuromusa) (Malonomonas)(Pelobacter)地杆菌科(Geobacteraceae) (Geoalkalibacter)地杆菌属(Geobacter) (Geopsychrobacter) (Geothermobacter) (Trichlorobacter)黏球菌目(Myxococcales)孢囊杆菌亚目(Cystobacterineae)孢囊杆菌科(Cystobacteraceae) (Anaeromyxobacter) (Archangium)孢囊杆菌属(Cystobacter) (Hyalangium)(Melittangium)(Stigmatella)黏球菌科(Myxococcaceae) (Angiococcus)(Corallococcus)黏球菌属(Myxococcus) (Pyxidicoccus)侏囊菌亚目(Nannocystineae) (Haliangiaceae)(Haliangium)(Kofleriaceae)(Kofleria)侏囊菌科(Nannocystaceae) (Enhygromyxa)侏囊菌属(Nannocystis) (Plesiocystis)堆囊菌亚目(Sorangineae)多囊菌科(Polyangiaceae) (Byssovorax)(Chondromyces)(Haploangium)*(Jahnella)多囊菌属(Polyangium)堆囊菌属(Sorangium)互营杆菌目(Syntrophobacterales)互营菌科(Syntrophaceae) (Desulfobacca)(Desulfomonile)(Smithella)互营菌属(Syntrophus)互营杆菌科(Syntrophobacteraceae) (Desulfacinum)(Desulfoglaeba) (Desulforhabdus)(Desulfovirga)互营杆菌属(Syntrophobacter) (Thermodesulforhabdus)ε-变形菌纲(Epsilonproteobacteria) 弯曲菌目(Campylobacterales)弯曲菌科(Campylobacteraceae)弓形杆菌属(Arcobacter)弯曲菌属(Campylobacter) (Dehalospirillum)硫磺单胞菌属(Sulfurospirillum)螺杆菌科(Helicobacteraceae)螺杆菌属(Helicobacter) (Sulfuricurvum)(Sulfurimonas)(Sulfurovum)(Thiovulum)沃林氏菌属(Wolinella)氢单胞菌科(Hydrogenimonadaceae)氢单胞菌属(Hydrogenimonas) (Nautiliales)(Nautiliaceae)(Caminibacter)(Lebetimonas)(Nautilia)(Nitratifractor)(Nitratiruptor)(Thioreductor)γ-变形菌纲(Gammaproteobacteria) 酸硫杆状菌目(Acidithiobacillales) 酸硫杆状菌科(Acidithiobacillaceae)酸硫杆状菌属(Acidithiobacillus)热硫杆状菌科(Thermithiobacillaceae)热硫杆状菌属(Thermithiobacillus)气单胞菌目(Aeromonadales)气单胞菌科(Aeromonadaceae)气单胞菌属(Aeromonas) (Oceanimonas)(Oceanisphaera)(Tolumonas)(Zobellella)琥珀酸弧菌科(Succinivibrionaceae)厌氧螺菌属(Anaerobiospirillum)反刍杆菌属(Ruminobacter)琥珀酸单胞菌属(Succinimonas)琥珀酸弧菌属(Succinivibrio)交替单胞菌目(Alteromonadales)交替单胞菌科(Alteromonadaceae) (Aestuariibacter)(Agarivorans)(Alishewanella)交替单胞菌属(Alteromonas) (Glaciecola)(Marinimicrobium)海杆菌属(Marinobacter)海细菌属(Marinobacterium)产微球茎菌属(Microbulbifer) (Saccharophagus)(Salinimonas)(Colwelliaceae)(Colwellia)(Thalassomonas)(Ferrimonadaceae)(Ferrimonas)(Paraferrimonas)(Idiomarinaceae)(Idiomarina)(Pseudidiomarina)(Moritellaceae)(Moritella)假交替单胞菌科(Pseudoalteromonadaceae) (Algicola)假交替单胞菌属(Pseudoalteromonas)冷单胞菌科(Psychromonadaceae)冷单胞菌属(Psychromonas)希万氏菌科(Shewanellaceae)希万氏菌属(Shewanella)科未定(Teredinibacter)(Endobugula)*心杆菌目(Cardiobacteriales)心杆菌科(Cardiobacteriaceae)心杆菌属(Cardiobacterium) (Dichelobacter)(Suttonella)着色菌目(Chromatiales)着色菌科(Chromatiaceae) (Allochromatium)(Amoebobacter)着色菌属(Chromatium)盐着色菌属(Halochromatium) (Isochromatium)(Lamprobacter)(Lamprocystis)(Marichromatium)亚硝化球菌属(Nitrosococcus)芬尼氏菌属(Pfennigia)棍着色菌属(Rhabdochromatium) (Rheinheimera)热着色菌属(Thermochromatium)硫碱球菌属(Thioalkalicoccus)硫橄榄菌属(Thiobaca)硫匣菌属(Thiocapsa)硫球菌属(Thiococcus)硫囊菌属(Thiocystis)硫网菌属(Thiodictyon)硫黄球菌属(Thioflavicoccus)硫盐匣菌属(Thiohalocapsa) (Thiolamprovum)(Thiopedia)硫红球菌属(Thiorhodococcus)硫红弧菌属(Thiorhodovibrio)硫螺菌属(Thiospirillum)外硫红螺旋菌科(Ectothiorhodospiraceae) 碱湖生菌属(Alkalilimnicola)碱螺菌属(Alkalispirillum) (Aquisalimonas)(Arhodomonas)(Ectothiorhodosinus)外硫红螺旋菌属(Ectothiorhodospira)盐红螺旋菌属(Halorhodospira) (Natronocella)硝化球菌属(Nitrococcus)硫碱螺旋菌属(Thioalkalispira)硫碱弧菌属(Thialkalivibrio)硫红螺旋菌属(Thiorhodospira)颗粒状球菌科(Granulosicoccaceae)颗粒状球菌属(Granulosicoccus)盐硫杆状菌科(Halothiobacillaceae)盐硫杆状菌属(Halothiobacillus) (Thiovirga)肠杆菌目(Enterobacteriales)肠杆菌科(Enterobacteriaceae) (Arsenophonus)(Brenneria)布赫纳氏菌属(Buchnera)(Budvicia)布丘氏菌属(Buttiauxella) (Calymmatobacterium)西地西菌属(Cedecea)柠檬酸杆菌属(Citrobacter)(Dickeya)爱德华氏菌属(Edwardsiella)肠杆菌属(Enterobacter)欧文氏菌属(Erwinia)埃希氏菌属(Escherichia) （包含大肠杆菌）(Ewingella)哈夫尼菌属(Hafnia)克雷伯氏菌属(Klebsiella)克吕沃氏菌属(Kluyvera)(Leclercia)(Leminorella)(Levinea)(Moellerella)(Morganella)(Obesumbacterium)泛菌属(Pantoea)(Pectobacterium)(Phlomobacter)*(Photorhabdus)邻单胞菌属(Plesiomonas)(Pragia)变形杆菌属(Proteus)普罗维登斯菌属(Providencia) (Rahnella)(Raoultella)糖杆菌属(Saccharobacter)沙门氏菌属(Salmonella)(Samsonia)沙雷氏菌属(Serratia)志贺氏菌属(Shigella)(Sodalis)(Tatumella)(Thorsellia)(Trabulsiella)(Wigglesworthia)致病杆菌属(Xenorhabdus)耶尔辛氏菌属(Yersinia) （包含鼠疫杆菌）(Yokenella)军团菌目(Legionellales)柯克斯体科(Coxiellaceae)(Aquicella)柯克斯体属(Coxiella)立克次小体属(Rickettsiella)军团菌科(Legionellaceae) (Fluoribacter)军团菌属(Legionella)(Sarcobium)(Tatlockia)甲基球菌目(Methylococcales)甲基球菌科(Methylococcaceae)甲基杆菌属(Methylobacter)甲基暖菌属(Methylocaldum)甲基球菌属(Methylococcus)甲基盐菌属(Methylohalobius)甲基微菌属(Methylomicrobium)甲基单胞菌属(Methylomonas)甲基八叠球菌属(Methylosarcina) (Methylosoma)甲基球形菌属(Methylosphaera)甲基热菌属(Methylothermus)海洋螺菌目(Oceanospirillales)食碱菌科(Alcanivoraceae)食碱菌属(Alcanivorax)(Fundibacter)(Kangiella)河氏菌科(Hahellaceae)(Endozoicomonas)河氏菌属(Hahella) (Halospina)(Zooshikella)盐单胞菌科(Halomonadaceae) (Carnimonas)色盐杆菌属(Chromohalobacter) (Cobetia)(Deleya)盐单胞菌属(Halomonas) (Halotalea)(Halovibrio) (Modicisalibacter)(Salicola)(Volcaniella)发酵杆菌属(Zymobacter)岸生菌科(Litoricolaceae)岸生菌属(Litoricola)海洋螺菌科(Oceanospirillaceae) (Amphritea)巴氏发菌属(Balneatrix)海单胞菌属(Marinomonas)海螺菌属(Marinospirillum) (Neptuniibacter) (Neptunomonas)(Nitrincola)海洋杆菌属(Oceanobacter)海洋螺菌属(Oceanospirillum)油螺旋菌属(Oleispira)假螺菌属(Pseudospirillum) (Reinekea)(Thalassolituus)嗜油菌科(Oleiphilaceae)嗜油菌属(Oleiphilus)糖螺菌科(Saccharospirillaceae) 糖螺菌属(Saccharospirillum)巴斯德氏菌目(Pasteurellales) 巴斯德氏菌科(Pasteurellaceae) 放线杆菌属(Actinobacillus) (Aggregatibacter) (Avibacterium)(Bibersteinia) (Gallibacterium)嗜血菌属(Haemophilus)(Histophilus)(Lonepinella)(Mannheimia)(Nicoletella)巴斯德氏菌属(Pasteurella) (Phocoenobacter) (Volucribacter)假单胞菌目(Pseudomonadales)莫拉菌科(Moraxellaceae)不动杆菌属(Acinetobacter) (Alkanindiges)布兰汉氏菌(Branhamella) (Enhydrobacter)莫拉菌属(Moraxella) (Perlucidibaca)冷杆菌属(Psychrobacter)假单胞菌科(Pseudomonadaceae) (Azomonas)(Azomonotrichon) (Azorhizophilus)(Azotobacter)纤维弧菌属(Cellvibrio) (Chryseomonas)(Flavimonas)(Mesophilobacter)假单胞菌属(Pseudomonas)根瘤杆菌属(Rhizobacter)皱纹单胞菌属(Rugamonas)蛇形菌属(Serpens)咸水球形菌目(Salinisphaerales)咸水球形菌科(Salinisphaeraceae) 咸水球形菌属(Salinisphaera)硫发菌目(Thiotrichales) (Francisellaceae)(Francisella)鱼立克次体科(Piscirickettsiaceae) (Cycloclasticus) (Hydrogenovibrio) (Methylophaga)鱼立克次体属(Piscirickettsia) (Sulfurivirga) (Thioalkalimicrobium) (Thiomicrospira)硫发菌科(Thiotrichaceae)无色菌属(Achromatium)贝扎托菌属(Beggiatoa)亮发菌属(Leucothrix)硫杆菌属(Thiobacterium)硫珠菌属(Thiomargarita)硫辫菌属(Thioploca)硫螺旋菌属(Thiospira)硫发菌属(Thiothrix)科未定(Caedibacter)(Fangia)弧菌目(Vibrionales)弧菌科(Vibrionaceae)(Aliivibrio)异单胞菌属(Allomonas) (Beneckea)链状球菌属(Catenococcus)肠弧菌属(Enterovibrio) (Grimontia)(Listonella)(Lucibacterium)发光杆菌属(Photobacterium) (Salinivibrio)弧菌属(Vibrio)黄色单胞菌目(Xanthomonadales)华杆菌科(Sinobacteraceae) (Hydrocarboniphaga)(Nevskia)华杆菌属(Sinobacter)黄色单胞菌科(Xanthomonadaceae)水单胞菌属(Aquimonas) (Arenimonas)(Aspromonas)(Dokdonella)(Dyella)(Frateuria)(Fulvimonas)(Ignatzschineria)(Luteibacter)(Luteimonas)(Lysobacter)假黄色单胞菌属(Pseudoxanthomonas) (Rhodanobacter)(Silanimonas) (Stenotrophomonas)热单胞菌属(Thermomonas)黄色单胞菌属(Xanthomonas) (Xylella)目未定碱单胞菌属(Alkalimonas) (Bowmanella)聚集杆菌属(Congregibacter)* (Methylohalomonas) (Methylonatrum) (Sedimenticola)(Solimonas)(Thiohalomonas) (Thiohalophilus)螺旋体门(Spirochaetes)螺旋体纲(Spirochaetes)螺旋体目(Spirochaetales)短螺旋体科(Brachyspiraceae)短螺旋体属(Brachyspira)小蛇菌属(Serpulina)钩端螺旋体科(Leptospiraceae)纤线菌属(Leptonema)钩端螺旋体属(Leptospira) (Turneriella)螺旋体科(Spirochaetaceae)疏螺旋体属(Borrelia) (Brevinema)(Clevelandina)(Cristispira)(Diplocalyx)(Hollandina)(Pillotina)螺旋体属(Spirochaeta)密螺旋体属(Treponema)柔膜菌门(Tenericutes)柔膜菌纲(Mollicutes)无胆甾原体目(Acholeplasmatales) 无胆甾原体科(Acholeplasmataceae) 无胆甾原体属(Acholeplasma)植原体属(Phytoplasma)*厌氧原体目(Anaeroplasmatales)厌氧原体科(Anaeroplasmataceae)厌氧原体属(Anaeroplasma)无甾醇原体属(Asteroleplasma)虫原体目(Entomoplasmatales)虫原体科(Entomoplasmataceae)虫原体属(Entomoplasma)中间原体属(Mesoplasma)螺原体科(Spiroplasmataceae)螺原体属(Spiroplasma)支原体目(Mycoplasmatales)支原体科(Mycoplasmataceae) (Allobaculum)(Eperythrozoon)(Haemobartonella)支原体属(Mycoplasma)脲原体属(Ureaplasma)目未定丹毒丝菌科(Erysipelothrichaceae) (Bulleidia)丹毒丝菌属(Erysipelothrix) (Holdemania)(Solobacterium)热脱硫杆菌门(Thermodesulfobacteria)热脱硫杆菌纲(Thermodesulfobacteria)热脱硫杆菌目(Thermodesulfobacteriales) 热脱硫杆菌科(Thermodesulfobacteriaceae) (Thermodesulfatator)热脱硫杆菌属(Thermodesulfobacterium)热微菌门(Thermomicrobia)热微菌纲(Thermomicrobia)热微菌目(Thermomicrobiales)热微菌科(Thermomicrobiaceae)热微菌属(Thermomicrobium)热袍菌门(Thermotogae)热袍菌纲(Thermotogae)热袍菌目(Thermotogales)热袍菌科(Thermotogaceae)(Fervidobacterium) (Geotoga)(Marinitoga)(Petrotoga)(Thermosipho)热袍菌属(Thermotoga)疣微菌门(Verrucomicrobia)丰祐菌纲(Opitutae)（注：正确形式似应为Opituti）丰祐菌目(Opitutales)丰祐菌科(Opitutaceae)交替球菌属(Alterococcus)丰祐菌属(Opitutus)紫红球菌目(Puniceicoccales)紫红球菌科(Puniceicoccaceae) (Cerasicoccus) (Coraliomargarita) (Pelagicoccus)紫红球菌属(Puniceicoccus)疣微菌纲(Verrucomicrobiae)疣微菌目(Verrucomicrobiales) 疣微菌科(Verrucomicrobiaceae) (Akkermansia)突柄杆菌属(Prosthecobacter) (Rubritalea)疣微菌属(Verrucomicrobium) (Xiphinematobacteraceae)* (Xiphinematobacter)*门未定(Jonquetella)纤线杆菌纲(Ktedonobacteria)纤线杆菌目(Ktedonobacterales) 纤线杆菌科(Ktedonobacteraceae) 纤线杆菌属(Ktedonobacter)。