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lammps模拟实例详解

# Big colloid particles and small LJ particles

units lj

This command sets the style of units used for a simulation. It determines the units of all quantities specified in the input script and data file, as well as quantities output to the screen, log file, and dump files. Typically, this command is used at the very beginning of an input script.这个指令设定模拟的格式,它决定了在输入脚本文件和数据文件以及在屏幕上显示的输出物,日志文件和垃圾文件中所有的单元格式。典型的是,它经常用于输入脚本的开头

For style lj, all quantities are unitless. Without loss of generality, LAMMPS sets the fundamental quantities mass, sigma, epsilon, and the Boltzmann constant = 1. The masses, distances, energies you specify are multiples of these fundamental values. The formulas relating the reduced or unitless quantity (with an asterisk) to the same quantity with units is also given. Thus you can use the mass & sigma & epsilon values for a specific material and convert the results from a unitless LJ simulation into physical quantities.

对于lj格式,所有数量都是无量纲的。不失一般性的,lammps设定了基本量质量sigma epsilon 和波尔兹曼常数=1。你定义的质量,距离,能量是这些基本值的倍数。公式把衰减量或者是无量纲量(用*)和单元给出的相同的量关联起来。因此你可以用mass,sigma, epsilon值表示一个具体材料并且改变一个无量纲lj模拟的物理量的结果。

mass = mass or m

distance = sigma, where x* = x / sigma

time = tau, where tau = t* = t (epsilon / m / sigma^2)^1/2

energy = epsilon, where E* = E / epsilon

velocity = sigma/tau, where v* = v tau / sigma

force = epsilon/sigma, where f* = f sigma / epsilon

torque = epsilon, where t* = t / epsilon

temperature = reduced LJ temperature, where T* = T Kb / epsilon

pressure = reduced LJ pressure, where P* = P sigma^3 / epsilon

dynamic viscosity = reduced LJ viscosity, where eta* = eta sigma^3 / epsilon / tau

charge = reduced LJ charge, where q* = q / (4 pi perm0 sigma epsilon)^1/2

dipole = reduced LJ dipole, moment where *mu = mu / (4 pi perm0 sigma^3 epsilon)^1/2

electric field = force/charge, where E* = E (4 pi perm0 sigma epsilon)^1/2 sigma / epsilon density = mass/volume, where rho* = rho sigma^dim

atom_style atomic 原子类型atomic(原子的)

Define what style of atoms to use in a simul
ation. This determines what attributes are associated with the atoms. This command must be used before a simulation is setup via a read_data, read_restart, or create_box command.

Define what style of atoms to use in a simulation. This determines what attributes are associated with the atoms. This command must be used before a simulation is setup via a read_data, read_restart, or create_box command.

定义在模拟中用到的原子类型,这个决定了与原子有关的属性,这个命令必须用在模拟被设定之前通过read_data, read_restart, or create_box

Atomic only the default values coarse-grain liquids, solids, metals

Atomic 附加属性是只是默认值用于粗粒液体,固体和金属的模拟

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