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clsi update 2012

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M02-A11 Disk Diffusion Method (2012)^

M100 -Summary of Major Changes

#Changes to CLSI documents are summarized in the

front of each document.

#Information listed in boldface type is new or modified

since the previous edition of M100 document.

#Dates of the recent breakpoint additions/revisions are

listed in the front of M100-S22.

3

Today’s Review:

M100 2012 changes

#Enterobacteriaceae

#Pseudomonas aeruginosa

#Staphylococcus species

4

Enterobacteriaceae -2012

1. Clarification on when to perform ESBL testing -briefly

2. Clarification on when to perform MHT

3. Re-revised ertapenem breakpoints for 2012

#Changed from new ones published in 2011

4. Added ciprofloxacin breakpoints for use with S. typhi and extraintestinal

isolates of Salmonella spp.

5

1

Susan Sharp, Ph.D.

Director, Kaiser Permanente Laboratory

MHT: Classification of Carbapenemases

Class

Carbapenemase

Found in Notes

A KPC

Enterobacteriaceae Hydrolyze all ?-lactams.Inhibited by clavulanic acid.SME

S. marcescens B

Metallo beta-lactamases

(IMP, VIM, GIM, SPM, NDM )

P. aeruginosa Enterobacteriaceae Acinetobacter S. Maltophilia

Hydrolyze all ?-lactams except aztreonam.

Somewhat inhibited by clavulanic acid.

Require zinc for enzymatic activity; inhibited by EDTA.

7

Reference: Queenan & Bush. 2007. Clin Microbiol Rev. 20:440

2. Clarification on when to perform MHT

Value of Modified Hodge test (MHT) for

Carbapenemase Detection

MHT

Carbapenemase (53)

Positive (N=35)

Negative (N=18)a Positive 24 (69%)11 (61%)Negative 7(20%)7 (39%)Not interpretable

4 (11%)

-

8

Reference: Girlich et al. 2012. J Clin Microbiol. 50:477

Sensitivity 77.4%; Specificity 38.9%. Better for KPC; poor for NDM-1

a

AmpC overproducers or ESBL +/-membrane permeability defect

CRE Examples

Organism MIC (μg/ml) 1

MHT Resistance

mechanism Ertap Imip Mero E. coli >16 R 4 R 4 R Pos Plasmid amp C

K. pneumoniae >16 R ≤0.25 S 8 R Pos ESBL E. coli >16 R 8 R >16 R Neg NDM-1K. pneumoniae

2 R

1 S

2 I

Pos

IMP-4

9

References: Anderson, KF et al. 2009. ICAAC. D-719

Limbago, BM. CLSI Agenda book. January 2011

10

Until laboratories can implement the current carbapenem

breakpoints, the Modified Hodge Test (MHT) should be performed as described ...

After implementation of the current breakpoints, MHT does not need to be performed other than for epidemiological or infection control purposes.

Not all carbapenemase-producing isolates of Enterobacteriaceae are MHT positive, and MHT-positive results may be encountered in isolates with carbapenem resistance mechanisms other than carbapenemase production.

Clarification on when to perform MHT: “Modified Carbapenemase Comment”

Reference: M100-S22; Table 2A, pages 45, 53 & 57

Why did CLSI revise ertapenem breakpoints for

13

14

OLD 2011 <0.25/0.5/>1.0NEW 2012 <0.5/1.0/>2.0

15

CLSI Document

MIC (μg/ml)

Disk Diffusion (mm)Susc

Int Res Susc Int Res M100-S20 (Jan. 2010) ≤24≥8≥1916-18≤15M100-S20U (June 2010) ≤0.250.5≥1≥2320-22≤19M100-S22 (Jan 2012)**

≤0.5

1.0

≥2

≥22

19-21

≤18

Enterobacteriaceae -Ertapenem Breakpoint Review

The story….

#

#

If fluoroquinolone-S, test nalidixic acid to detect reduced

fluoroquinolone susceptibility #

If nalidixic acid-R…..

#

Inform clinician that…

#“The isolate may not be eradicated by fluoroquinolone treatment; infectious diseases consult suggested.”

17

Salmonella spp. Extraintestinal Isolates: Nalidixic Acid -Old Recommendations

Reference: M100-S21. Table 2A. Page 46.

Salmonella spp.

Fluoroquinolone Resistance

Genotype

Phenotype

Nalidixic Acid

Ciprofloxacin

MIC (μg/ml)

No resistance genes

Usually

Susceptible ≤0.06

gyr A (single mutation) 1 chromosomal Usually Resistant 0.12 -1.0 gyr A, gyr B (multiple mutations)chromosomal

Resistant ≥4 qnr +/-; aac(6’)-lb-cr 2plasmid (newer mechanism)

Often Susceptible

0.12 -1.0

18

1 Low level resistance (reduced susceptibility); not detected with “standard”Enterobacteriaceae ciprofloxacin

breakpoints

2 qnr genes encodes for proteins that protect DNA-gyrase; aac(6’)1b-cr proteins modify quinolones making

them ineffective. Reports of delayed response to ciprofloxacin therapy or treatment failure with S. typhi and extraintestinal infections with these mechanisms.

Salmonella spp. USA 2009% S to Ciprofloxacin at MICs

Organism N

Ciprofloxacin MIC (μg/ml)

(%)≤0.06

0.12-1.0≥2.0Salmonella spp.(non-typhoidal)219297.7 2.20.1Salmonella typhi

361

39.9

56.5

3.6

19

https://www.doczj.com/doc/723900374.html,/narms/

CDC’s National Antimicrobial Resistance Monitoring System (NARMS)

20

Reference: CLSI Agenda Book January 2011

Enterobacteriaceae :

2012 Ciprofloxacin Breakpoints

Organism

DD (mm)MIC (μg/ml)

Susc Int Res Susc Int Res Enterobacteriaceae other than S. typhi and extraintestinal Salmonella spp. (remains same as for other enterics)≥21

16-20

≤15

≤1

2

≥4

S. typhi and extraintestinal Salmonella spp.

≥3121-30≤20≤0.060.12-0.5≥1

21

Reference: M100-S22. Table 2A. Page 48

2012New

Eliminates the need to screen with Naladixic acid

S. typhi and Extraintestinal Salmonella spp:Ciprofloxacin Testing

#Optimal to do ciprofloxacin MIC

#

The low MIC ranges reflected in new 2012 breakpoints may not be available on some automated systems –consider Etest?

#

If doing disk diffusion, consider testing nalidixic acid and ciprofloxacin #Nalidixic acid does best for isolates with gyrase mutations (gyrA)#Ciprofloxacin does best for isolates with plasmid-encoded gene mutations #

Breakpoints for other fluoroquinolones (e.g., levofloxacin) under evaluation

22

S. typhi & Extraintestinal Salmonella spp:Nalidixic Acid

#Nalidixic acid test, although not optimal, remains in 2012 M100-S22#

NOTES:

#

“Strains of Salmonella that test resistant to nalidixic acid may be associated with clinical failure or delayed response in fluoroquinolone-treated patients with extraintestinal salmonellosis.”

#

“However, nalidixic acid may not detect all mechanisms of fluoroquinolone resistance. “

#

CLSI considered deleting nalidixic acid test, however, it was retained due to plea from Latin American countries and others where S. typhi is more common and sophisticated susceptibility testing is lacking.

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Reference: M100-S22. Table 2A. Page 48

Pseudomonas aeruginosa

1. Beta-lactam antibiotics:#Lowered breakpoints for:

#piperacillin

#piperacillin-tazobactam #ticarcillin

#

ticarcillin-clavulanic acid

2. Carbapenems:

#Lowered breakpoints for:

#imipenem #

meropenem

#

Added breakpoints for doripenem

24

#

Reference: Tam et al. 2008. Clin Infect Dis. 46:862

22.2%

85.7%

30.0%

20.5%

“Susceptible”

Example: Piperacillin -tazobactam MIC distribution Blue = wild type isolates

Red = isolates with acquired “R ”mechanism

Reference: https://www.doczj.com/doc/723900374.html,

P.aeruginosa

Old Breakpoints S <64 R >128

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Pseudomonas aeruginosa:

Breakpoint Revisions

Agent Old M100-S21New M100-S22

Susc Int Res Susc Int Res Piperacillin ≤64-≥128≤1632-64≥128Piperacillin-tazobactam ≤64/4-≥128/4≤16/432/4-64/4≥128/4Ticarcillin ≤64-≥128≤1632-64≥128Ticarcillin-clavulanate

≤64/2

-≥128/2

≤16/2

32/2-64/2

≥128/2

Reference: M100-S22. Table 2B-1. Page 63

Corresponding DD breakpoints also revised.

1. Lowered breakpoints for Beta-lactam antibiotics:

#

P. aeruginosa MIC breakpoints are now the same as those for Enterobacteriaceae (with slight differences in disk diffusion breakpoints).

#

No more necessity for combination therapy when organisms are within the new, lowered “S”range. #

Deleted :

#

Comment from Table 2B-1 -“Rx:The susceptible category for ?-lactam implies the need for high-dose therapy for serious infections caused by P. aeruginosa . For these infections, monotherapy has

been associated with clinical failure.”

% MIC (N=7,846 Sentry 2005-09)

30

Reference: CLSI Agenda Book June 2011

Susc

Int

Res

OLD <4/8/>16NEW <2/4/>8

P. aeruginosa -% S

Old vs. New Carbapenem Breakpoints

(N=7,846 Sentry Surv. 2005-09)

Agent

% S

M100-S21 2011<4 / 8 / >16M100-S22 2012<2 / 4 / >8

Doripenem -76 Imipenem 7470Meropenem

79

72

31

32

Pseudomonas aeruginosa :Breakpoint Revisions

Agent

Old (M100-S21)

New M100-S22

Susc

Int Res

Susc Int Res Doripenem None ≤24≥8Imipenem ≤48≥16≤24≥8Meropenem

≤4

8

≥16≤2

4

≥8

Reference: M100-S22. Table 2B-1. Page 63

Corresponding DD breakpoints also revised.

Staphylococcus species

#

Penicillin testing

33

Staphylococcus spp. –Penicillin

The story…..

#

> 90% of staphylococci are penicillin “R”

#

Penicillin rarely considered for treatment of staphylococcal

infections #…BUT -Penicillin might be considered for infections

requiring lengthy therapy (e.g., endocarditis, osteomyelitis) IF penicillin were known to be “S”#

Some Staphylococcus spp. that test “S”by MIC or disk diffusion may possess a ?-lactamase (BL) and may fail penicillin therapy

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36

-Sub isolate to blood agar

-Induction: Drop disk to induce BL production (e.g., oxacillin or cefoxitin)Pos Neg

Staphylococcus aureus

?-lactamase (BL)

#Induced nitrocefin BL test usually, but not always, detects

staphylococcal BL

#Other BL tests are more sensitive for BL:

#Cloverleaf test

#Penicillin disk zone edge test

#bla Z gene PCR not optimal for BL

#bla Z codes for BL production

#Several types of bla Z genes

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Staphylococcus aureus

?-lactamase (BL) Study

#348 MSSA (low penicillin MICs) characterized for bla Z by PCR:

#303 PCR negative

#45 PCR positive

#Methods:

#Penicillin MICs

#Phenotypic BL tests

#Nitrocefin -Cefinase

#Nitrocefin -Dryslide

#Cloverleaf assay

#Penicillin disk zone edge

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*Statens Serum Institut (Denmark), CDC (Atlanta), MGH (Boston)

Staphylococcus aureus

?-lactamase (BL) Study

Pen MIC

(μg/ml)

bla Z functional

Neg Pos

0.0082

0.01615

0.0321801

0.06905

0.121517

0.25114

0.54

1.0

2.02

4.01

30345

?1 bla Z neg and penicillin “R”

?23 bla Z pos and penicillin “S”

Reference: CLSI Agenda Book January 2011.

S

R

40

?5% sheep blood agar

?S. aureus ATCC 25923 as the

indicator organism

Isolates A-D are all

BL positive

A

B

C

D

BL negative

41

?-lactamase

positive

?-lactamase

negative

aureus

Disk Zone Edge Test (10 U penicillin disk and standard disk diffusion method)

?-lactamase negative,

S. aureus QC:

Neg -ATCC 25923

Pos -ATCC 29213

Reference: M100-S22. Table 2C Supplemental Table 1. Page 83

Staphylococcus aureus

3 Lab BL Study Results (N=348)

Test Sensitivity Specificity

Cefinase77%100%

Dryslide88%100%

Cloverleaf100%100%

Penicillin disk zone edge96%100%

43 Reference: CLSI Agenda Book January, 2011

Staphylococcus spp. –Penicillin

Optional Strategy

#Report penicillin if “R”

#Suppress penicillin if “S”and add note “Contact laboratory

if penicillin results needed”

#If penicillin “S”and penicillin results needed, perform:

#S. aureus

#Nitrocefin BL test , and if negative%

#Penicillin zone edge test

#CoNS (including S. lugdunensis)

#Induced nitrocefin BL test

45

Summary

#CLSI updates AST tables (M100) each January.

#CLSI updates documents that describe how to perform reference disk

diffusion (M02) and reference MIC (M07) tests every 3 years.

#Changes to CLSI documents are summarized in the front of each

document.

#Information listed in boldface type is new or modified since the

previous edition of M100.

#Recent breakpoint addition/revision dates are listed in the front of

M100-S22.

#Minutes of CLSI AST Subcommittee meetings and other materials

are available at https://www.doczj.com/doc/723900374.html,.

46

Action Items -1

#Doripenem breakpoints have been added to M100-S22. --Results

from testing other carbapenems cannot be used to predict results

for doripenem.

#QC ranges for P. aeruginosa ATCC 27853 with cefepime have

been revised.

# E. coli ATCC 25922 with colistin have been revised.

#Ertapenem breakpoints for Enterobacteriaceae have been revised.

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#Clinical laboratories that have not implemented current CLSI

breakpoints for cephalosporins and aztreonam for

Enterobacteriaceae should continue to perform ESBL testing.

#Clinical laboratories that have not yet implemented current

CLSI breakpoints for carbapenems and Enterobacteriaceae

should continue to perform Modified Hodge test.

#New ciprofloxacin breakpoints have been added to

Enterobacteriaceae tables be used for S. typhi and Salmonella

spp. from extraintestinal sources.

48

Action Items -2

#

Applying new breakpoints for S. typhi and Salmonella spp. from extraintestinal sources is preferred to nalidixic acid testing to detect reduced fluoroquinolone susceptibility.

#Breakpoints for piperacillin, piperacillin-tazobactam, ticarcillin,

ticarcillin-clavulanic acid, imipenem, and meropenem have been revised for P. aeruginosa .

#

S. aureus isolates where penicillin zones are ≥29 mm or penicillin MICs are ≤0.12 μg/ml, a penicillin ‘disk zone edge test’should be performed before reporting penicillin susceptible.

49

Action Items -3

What are some of the issues currently being addressed by CLSI AST Subcommittee?

#Fluoroquinolone breakpoints for several organism groups #

Quality control

#Frequency for MIC and disk diffusion tests; frequency for screen tests #

QC ranges for colistin / polymyxin B; optimal medium for testing

#

Intrinsic resistance tables for non-Enterobacteriaceae , for gram-+ bacteria #

Enterobacteriaceae

#Levofloxacin breakpoints for S. typhi and extraintestinal Salmonella spp.#Cefepime breakpoints

#

Colistin / polymyxin B breakpoints

#

Staphylococcus spp.

#

Eliminate oxacillin disk diffusion test for S. aureus #

Streptococcus pneumoniae

#Doxycycline and tetracycline breakpoints #

Inducible clindamycin resistance

50

谢谢。

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